RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 MTF1Q14872 753 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 FAM26FQ5R3K3 315 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 TRAPPC11Q7Z392 1133 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 CPA6Q8N4T0 437 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 RIN3Q8TB24 985 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 OSCP1Q8WVF1 389 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 KBTBD7Q8WVZ9 684 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 ATP2A3Q93084 1043 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 DHX58Q96C10 678 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 CHFRQ96EP1 664 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 SPATA17Q96L03 361 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 SLC22A12Q96S37 553 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 MMS19Q96T76 1030 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 C7orf25Q9BPX7 421 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 SEMA4GQ9NTN9 838 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 DUS2Q9NX74 493 aaKnown RBP12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 SLC8A2Q9UPR5 921 aa12.44□□□□□ -0.42
UBE2D4-204ENST00000440899 TGFB1I1O43294 461 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 PDGFRBP09619 1106 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 DLATP10515 647 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 PDIA4P13667 645 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 TNNI1P19237 187 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 BDNFP23560 247 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 GJA4P35212 333 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 IFNAR2P48551 515 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 PDE6CP51160 858 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 GALK1P51570 392 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 USP4Q13107 963 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 NR1H3Q13133 447 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 ZNF77Q15935 545 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 CSRP2Q16527 193 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 FBXO43Q4G163 708 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 PKN3Q6P5Z2 889 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 SHC4Q6S5L8 630 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 CAMKK1Q8N5S9 505 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 FAM160A2Q8N612 972 aaPredicted RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 ARL14EPQ8N8R7 260 aaPredicted RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 RDH13Q8NBN7 331 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 TTC16Q8NEE8 873 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 MYCBPAPQ8TBZ2 947 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 NETO1Q8TDF5 533 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 FNBP1Q96RU3 617 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 P2RY13Q9BPV8 354 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 ECT2Q9H8V3 914 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 MAGEF1Q9HAY2 307 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 FBRSL1Q9HCM7 1045 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 CRTAC1Q9NQ79 661 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 AGPAT3Q9NRZ7 376 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 EHD2Q9NZN4 543 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 TRPM5Q9NZQ8 1165 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 GCNT4Q9P109 453 aa12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 CGNQ9P2M7 1197 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.43□□□□□ -0.42
UBE2D4-204ENST00000440899 UBE4BO95155 1302 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 TPRP12270 2363 aaKnown RBP12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 DCDC2BA2VCK2 349 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 C2orf78A6NCI8 922 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 RNF40O75150 1001 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 TACC1O75410 805 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 CST3P01034 146 aaPredicted RBP12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 EGFP01133 1207 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 TCF3P15923 654 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 PFKLP17858 780 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 HDCP19113 662 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 ANXA13P27216 316 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 HOXC13P31276 330 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 GNL1P36915 607 aaPredicted RBP12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 GRIK1P39086 918 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 PXNP49023 591 aaPredicted RBP12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 CYP2J2P51589 502 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 CYP27A1Q02318 531 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 CYP24A1Q07973 514 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 KCNB1Q14721 858 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 PSMD6Q15008 389 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 PRR23CQ6ZRP0 262 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 DENND5BQ6ZUT9 1274 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 UNC13DQ70J99 1090 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 HS2ST1Q7LGA3 356 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 CACNA2D4Q7Z3S7 1137 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 XXYLT1Q8NBI6 393 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 SH3RF2Q8TEC5 729 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 GAB3Q8WWW8 586 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 MYLPFQ96A32 169 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 LOXL4Q96JB6 756 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 CGRRF1Q99675 332 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 SNX25Q9H3E2 840 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 ARHGAP26Q9UNA1 814 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 DENND4CQ5VZ89 1909 aa12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
UBE2D4-204ENST00000440899 SDK1Q7Z5N4 2213 aa12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 PVALEFA0A1B0GWK0 134 aa12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 SLC30A4O14863 429 aa12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 TRIM66O15016 1216 aa12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 CLIC2O15247 247 aa12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 POLR2DO15514 142 aaKnown RBP12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 RPP40O75818 363 aaKnown RBP12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 PTPN1P18031 435 aaKnown RBP12.41□□□□□ -0.42
UBE2D4-204ENST00000440899 PPP3CCP48454 512 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms