RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PRR23AA6NEV1 266 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 STAU1O95793 577 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 SP9P0CG40 484 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 RPL13P26373 211 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 WEE1P30291 646 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 PIK3CAP42336 1068 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 RPS9P46781 194 aaKnown RBP21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 TMEM150AQ86TG1 271 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 PLEKHO2Q8TD55 490 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 GZF1Q9H116 711 aaPredicted RBP21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 SMYD3Q9H7B4 428 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 DMAC2Q9NW81 257 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 GTSE1Q9NYZ3 720 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 R4GN57 208 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 ATP8B3O60423 1300 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 VPS13AQ96RL7 3174 aa21.18■□□□□ 0.98
SHROOM1-204ENST00000440118 FANCMQ8IYD8 2048 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 TRAV19A0A0A6YYK7 116 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 ARNTLO00327 626 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 KRT13P13646 458 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 SOX9P48436 509 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 CSTF1Q05048 431 aaKnown RBP21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 LRRC32Q14392 662 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 KCNB1Q14721 858 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 DENND5BQ6ZUT9 1274 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 ASCL5Q7RTU5 278 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 MON1AQ86VX9 555 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 CLDN23Q96B33 292 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 IMPG2Q9BZV3 1241 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 ELOVL4Q9GZR5 314 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 XYLT2Q9H1B5 865 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 TDP1Q9NUW8 608 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 RMND1Q9NWS8 449 aa21.17■□□□□ 0.98
SHROOM1-204ENST00000440118 PTPRZ1P23471 2315 aaPredicted RBP21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 SOBPA7XYQ1 873 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 FAM163BP0C2L3 166 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 PTPN1P18031 435 aaKnown RBP21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 TRIM21P19474 475 aaKnown RBP21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 RAP1GAPP47736 663 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 DLG4P78352 724 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 IFRD2Q12894 506 aaPredicted RBP21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 PPP2R5DQ14738 602 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 B3GALNT2Q8NCR0 500 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 TMC2Q8TDI7 906 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 USP13Q92995 863 aaPredicted RBP21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 SPATA17Q96L03 361 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 MYRFLQ96LU7 910 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 LRRC3BQ96PB8 259 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 MED10Q9BTT4 135 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 DPEP3Q9H4B8 488 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 MMRN2Q9H8L6 949 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 LMAN1LQ9HAT1 526 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 FBXO4Q9UKT5 387 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 TRAF3IP3Q9Y228 551 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 CCL26Q9Y258 94 aa21.16■□□□□ 0.98
SHROOM1-204ENST00000440118 F8VP50 259 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 SPECC1L-ADORA2AF8WAN1 911 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 USP17L7P0C7H9 530 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 CTHP32929 405 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 PDE6CP51160 858 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 VAMP7P51809 220 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 MLLT6P55198 1093 aaPredicted RBP21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 CLDN10P78369 228 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 TNK2Q07912 1038 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 ITPRIPL2Q3MIP1 535 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 INTS8Q75QN2 995 aaKnown RBP21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 RALGPS2Q86X27 583 aaPredicted RBP21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 FAM186BQ8IYM0 893 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 GUF1Q8N442 669 aaKnown RBP21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 CCDC150Q8NCX0 1101 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 TMEM174Q8WUU8 243 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 TNIP3Q96KP6 325 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 CEP295NLQ96MC4 621 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 HINFPQ9BQA5 517 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 SEMA4AQ9H3S1 761 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 VRTNQ9H8Y1 702 aa21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 HOOK1Q9UJC3 728 aaKnown RBP21.15■□□□□ 0.98
SHROOM1-204ENST00000440118 TADA3O75528 432 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 ABL1P00519 1130 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 C4BPAP04003 597 aaKnown RBP21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 MTAPQ13126 283 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 PNOCQ13519 176 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 SGSM1Q2NKQ1 1148 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 ZACNQ401N2 412 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 IER2Q9BTL4 223 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 ZNF518BQ9C0D4 1074 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 CHRDQ9H2X0 955 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 TRPM5Q9NZQ8 1165 aa21.14■□□□□ 0.97
SHROOM1-204ENST00000440118 IKBKBO14920 756 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 MAPK13O15264 365 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 KINO60870 393 aaKnown RBP21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 SMC2O95347 1197 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 LMNAP02545 664 aaKnown RBP21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 TRIM49P0CI25 452 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 TRIM49CP0CI26 452 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 PSMC2P35998 433 aaKnown RBP21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 CDH8P55286 799 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 FAM160A1Q05DH4 1040 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 ADAM9Q13443 819 aa21.13■□□□□ 0.97
SHROOM1-204ENST00000440118 ZNF268Q14587 947 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms