RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 IFI35P80217 286 aaPredicted RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 GRIK3Q13003 919 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 ZKSCAN8Q15776 578 aaPredicted RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 C7orf31Q8N865 590 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 CCHCR1Q8TD31 782 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 GGT7Q9UJ14 662 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 ANK1P16157 1881 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 F8VP50 259 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 GPR32O75388 356 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 ECEL1O95672 775 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 ATF7P17544 494 aaPredicted RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 HOXA11P31270 313 aaPredicted RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 CETN2P41208 172 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 IFNAR2P48551 515 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 PSMC1P62191 440 aaKnown RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 CDC42EP1Q00587 391 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 C17orf99Q6UX52 265 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 DDX27Q96GQ7 796 aaKnown RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 ZNF570Q96NI8 536 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 APBA2Q99767 749 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 HERPUD2Q9BSE4 406 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 ELOVL4Q9GZR5 314 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 CXCL16Q9H2A7 254 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 NXF3Q9H4D5 531 aaKnown RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 INTS9Q9NV88 658 aaKnown RBP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.89□□□□□ -0.03
LIMD1-202ENST00000440097 TJP2Q9UDY2 1190 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 PCDHGC3Q9UN70 934 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 SNX9Q9Y5X1 595 aa14.89□□□□□ -0.03
LIMD1-202ENST00000440097 SMIM35A0A1B0GVV1 85 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PODXLO00592 558 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PSTPIP1O43586 416 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 CILPO75339 1184 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 DARSP14868 501 aaKnown RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 NQO1P15559 274 aaKnown RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 NDST1P52848 882 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PMS2P54278 862 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 CRHR2Q13324 411 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 ZNF268Q14587 947 aaPredicted RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 FSCN1Q16658 493 aaKnown RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PTPN20Q4JDL3 420 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 ATP13A4Q4VNC1 1196 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 SESTD1Q86VW0 696 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 SLC4A11Q8NBS3 891 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 ACSF2Q96CM8 615 aaPredicted RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 NOP53Q9NZM5 478 aaKnown RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 KLK14Q9P0G3 267 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 STRIP2Q9ULQ0 834 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PASKQ96RG2 1323 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 TMEM191CA6NGB0 347 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PIK3R2O00459 728 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 KIF3CO14782 793 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 DIAPH2O60879 1101 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 UBOX5O94941 541 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 NUDT17P0C025 328 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 KRT3P12035 628 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 DUPD1Q68J44 220 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 UBA3Q8TBC4 463 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 SOCS4Q8WXH5 440 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PRCCQ92733 491 aaPredicted RBP14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PGM2Q96G03 612 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PARP2Q9UGN5 583 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 ASIC3Q9UHC3 531 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 PCYOX1Q9UHG3 505 aa14.88□□□□□ -0.03
LIMD1-202ENST00000440097 RGS16O15492 202 aaPredicted RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 KRT1P04264 644 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 TCF4P15884 667 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 NCALDP61601 193 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 HIC1Q14526 733 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 SPDYCQ5MJ68 293 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 DENND2CQ68D51 928 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 FBXO25Q8TCJ0 367 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 MAIP1Q8WWC4 291 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 PABPC3Q9H361 631 aaKnown RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 CYP3A43Q9HB55 503 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 CHST7Q9NS84 486 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 ZDHHC18Q9NUE0 388 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 CITO14578 2027 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 C17orf102A2RUQ5 167 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 FSCN2O14926 492 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 RECQL4O94761 1208 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 MICAL2O94851 1124 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 PSMA2P25787 234 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 PTGIRP43119 386 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 VPS41P49754 854 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 TRIP13Q15645 432 aaPredicted RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 GNASQ5JWF2 1037 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 UBAP2Q5T6F2 1119 aaKnown RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 UHMK1Q8TAS1 419 aaKnown RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 TMEM40Q8WWA1 233 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 C18orf25Q96B23 403 aaPredicted RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 ZMAT2Q96NC0 199 aaKnown RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 CPXM1Q96SM3 734 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 OSBPL8Q9BZF1 889 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 TUBGCP4Q9UGJ1 667 aa14.87□□□□□ -0.03
LIMD1-202ENST00000440097 BARX2Q9UMQ3 279 aaPredicted RBP14.87□□□□□ -0.03
LIMD1-202ENST00000440097 ALADP13716 330 aa14.86□□□□□ -0.03
LIMD1-202ENST00000440097 CALRP27797 417 aaKnown RBP14.86□□□□□ -0.03
LIMD1-202ENST00000440097 RFC1P35251 1148 aaPredicted RBP14.86□□□□□ -0.03
LIMD1-202ENST00000440097 RPL21P46778 160 aaKnown RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms