RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 NGRNQ9NPE2 291 aaKnown RBP7.93□□□□□ -1.14
UBR3-205ENST00000439681 TLR9Q9NR96 1032 aa7.93□□□□□ -1.14
UBR3-205ENST00000439681 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.93□□□□□ -1.14
UBR3-205ENST00000439681 PYCARDQ9ULZ3 195 aa7.93□□□□□ -1.14
UBR3-205ENST00000439681 SSX2IPQ9Y2D8 614 aa7.93□□□□□ -1.14
UBR3-205ENST00000439681 MTMR11A4FU01 709 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 M0QYV0 167 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 LPXNO60711 386 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 SEC24AO95486 1093 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 CYLC1P35663 651 aaPredicted RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 RPL34P49207 117 aaKnown RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 SMARCB1Q12824 385 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 PTP4A2Q12974 167 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 SMC1AQ14683 1233 aaKnown RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 NFE2Q16621 373 aaPredicted RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 CFAP221Q4G0U5 840 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 HS1BP3Q53T59 392 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 CCDC122Q5T0U0 273 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 PLPP4Q5VZY2 271 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 ACAD10Q6JQN1 1059 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 PMF1Q6P1K2 205 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 LILRA6Q6PI73 481 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 CLEC20AQ6ZU45 233 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 VPS36Q86VN1 386 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 SPATA2LQ8IUW3 424 aaPredicted RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 TTC9BQ8N6N2 239 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 TMEM35BQ8NCS4 154 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 C1orf131Q8NDD1 294 aaKnown RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 ACRBPQ8NEB7 543 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 ZNF461Q8TAF7 563 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 FUBP3Q96I24 572 aaKnown RBP eCLIP7.92□□□□□ -1.141e-6■■□□□ 12.9
UBR3-205ENST00000439681 KCNK16Q96T55 309 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 DESI2Q9BSY9 194 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 PDCL3Q9H2J4 239 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 ENTPD7Q9NQZ7 604 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 SEPT11Q9NVA2 429 aaKnown RBP7.92□□□□□ -1.14
UBR3-205ENST00000439681 SLC27A5Q9Y2P5 690 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 PCDHB5Q9Y5E4 795 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 ADGRG1Q9Y653 693 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 LAMA3Q16787 3333 aa7.92□□□□□ -1.14
UBR3-205ENST00000439681 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 TMCO5BA8MYB1 307 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 HHLA1C9JL84 531 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 RTN2O75298 545 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 AP1G2O75843 785 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 CSPG5O95196 566 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 FTLP02792 175 aaPredicted RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 FAM200BP0CF97 657 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 CPB1P15086 417 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 NPR3P17342 541 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 MAGEA11P43364 429 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 NDUFV1P49821 464 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 MAP3K7CLP57077 242 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 CREMQ03060 361 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 CENPCQ03188 943 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 BST2Q10589 180 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 DUSP4Q13115 394 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 TPGS2Q68CL5 300 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PDE12Q6L8Q7 609 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 C4orf50Q6ZRC1 276 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PHF13Q86YI8 300 aaPredicted RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 MICAL1Q8TDZ2 1067 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 GDPD5Q8WTR4 605 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 STK32AQ8WU08 396 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 C2orf15Q8WU43 125 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 SLC4A5Q9BY07 1137 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PACSIN1Q9BY11 444 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 UBXN6Q9BZV1 441 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 ABCB6Q9NP58 842 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 KRT82Q9NSB4 513 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 ABI2Q9NYB9 513 aaPredicted RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 HESX1Q9UBX0 185 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 TJP2Q9UDY2 1190 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 AFF4Q9UHB7 1163 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 PCDHA13Q9Y5I0 950 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 A0A0U1RQJ8 604 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 RCCD1A6NED2 376 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 XPO1O14980 1071 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 TGM5O43548 720 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 SETSIPP0DME0 302 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 HAPLN1P10915 354 aaPredicted RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 ATF2P15336 505 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 MMP8P22894 467 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 MAGEA1P43355 309 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PLA2G4AP47712 749 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 GPR15P49685 360 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 BCAT1P54687 386 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 ADCY1Q08828 1119 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PTPN20Q4JDL3 420 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PRPF38BQ5VTL8 546 aaKnown RBP7.91□□□□□ -1.14
UBR3-205ENST00000439681 VSTM1Q6UX27 236 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 TMEM110Q86TL2 294 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 PIGZQ86VD9 579 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 MCOLN2Q8IZK6 566 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 SPPL2BQ8TCT7 592 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 ATRIPQ8WXE1 791 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 SMARCD1Q96GM5 515 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 CPXM1Q96SM3 734 aa7.91□□□□□ -1.14
UBR3-205ENST00000439681 EMILIN2Q9BXX0 1053 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms