RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 NUB1Q9Y5A7 615 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCDHB4Q9Y5E5 795 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCDHGC5Q9Y5F6 944 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 SAR1BQ9Y6B6 198 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 CDY2AQ9Y6F7 541 aa4.23□□□□□ -1.73
HMGB1P37-201ENST00000439613 NCANO14594 1321 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 GRIN2DO15399 1336 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ELOA3CA0A087WX78 387 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SMIM28A0A1B0GU29 152 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A1W2PQ45 241 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 A0A1W2PQY0 241 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ELOA3DA6NLF2 546 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ADARB2-AS1A8MUL3 147 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 EFCAB8A8MWE9 144 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ARVCFO00192 962 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 DNM1LO00429 736 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 DYNC1I1O14576 645 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CTIFO43310 598 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF623O75123 536 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 RECQL4O94761 1208 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 MTA2O94776 668 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 MOCS3O95396 460 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SGPL1O95470 568 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CST3P01034 146 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CHRNA1P02708 482 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 FTLP02792 175 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ITGB3P05106 788 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 NFICP08651 508 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PNMA6AP0CW24 399 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 EPXP11678 715 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ITGA4P13612 1032 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 TCP1P17987 556 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 FGFR4P22455 802 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ALAS2P22557 587 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 GNA15P30679 374 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 POLR2BP30876 1174 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ASPAP45381 313 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 MAPK8P45983 427 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOP2P46087 812 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 NSFP46459 744 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF132P52740 706 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SNX16P57768 344 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 TNNC1P63316 161 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CAP1Q01518 475 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 FMO1Q01740 532 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CKAP4Q07065 602 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PAK2Q13177 524 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 BFSP2Q13515 415 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 RPS6KA1Q15418 735 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 STILQ15468 1287 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZBTB6Q15916 424 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PCSK7Q16549 785 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CLEC16AQ2KHT3 1053 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 WDR72Q3MJ13 1102 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ELOA3BQ3SY89 546 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 FBXO47Q5MNV8 452 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBXN11Q5T124 520 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 COL13A1Q5TAT6 717 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 TTC39BQ5VTQ0 682 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SPOPLQ6IQ16 392 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLCO4C1Q6ZQN7 724 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 HFE2Q6ZVN8 426 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 MRPL10Q7Z7H8 261 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 NOP9Q86U38 636 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 FAM228AQ86W67 206 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PHF13Q86YI8 300 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 TMEM192Q8IY95 271 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CEP120Q8N960 986 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 C1orf127Q8N9H9 656 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 RBBP8NLQ8NC74 664 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SMG8Q8ND04 991 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ELOA3Q8NG57 546 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 LNX1Q8TBB1 728 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC35G2Q8TBE7 412 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CAGE1Q8TC20 777 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SLC20A1Q8WUM9 679 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 TMEM40Q8WWA1 233 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF606Q8WXB4 792 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 RFFLQ8WZ73 363 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 DDX1Q92499 740 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 KAT5Q92993 513 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PGBD4Q96DM1 585 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 BTBD6Q96KE9 485 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF560Q96MR9 790 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ASB16Q96NS5 453 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 EIF2AQ9BY44 585 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 RBCK1Q9BYM8 510 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 UBE2OQ9C0C9 1292 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 ZNF518BQ9C0D4 1074 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 MIS12Q9H081 205 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 APOBEC3GQ9HC16 384 aaKnown RBP4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 STARD7Q9NQZ5 370 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CISHQ9NSE2 258 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 CTTNBP2NLQ9P2B4 639 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 UVRAGQ9P2Y5 699 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 RNF14Q9UBS8 474 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 TRIM10Q9UDY6 481 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 PARP2Q9UGN5 583 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 SIX4Q9UIU6 781 aa4.22□□□□□ -1.73
HMGB1P37-201ENST00000439613 GTF3C4Q9UKN8 822 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms