RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 ABCB6Q9NP58 842 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 TLR9Q9NR96 1032 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 TAS2R14Q9NYV8 317 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 INTUQ9ULD6 942 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 REXO2Q9Y3B8 237 aaKnown RBP21.9■■□□□ 1.1
CHD3-204ENST00000439235 GBF1Q92538 1859 aa21.9■■□□□ 1.1
CHD3-204ENST00000439235 A0A1W2PPC1 479 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 ZSCAN12O43309 604 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 LPXNO60711 386 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 FTLP02792 175 aaPredicted RBP21.89■■□□□ 1.09
CHD3-204ENST00000439235 H2AFZP0C0S5 128 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 OR1D2P34982 312 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 NDUFV1P49821 464 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 SNX16P57768 344 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 ROR1Q01973 937 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 PDE4CQ08493 712 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 PDCLQ13371 301 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 GPM6BQ13491 265 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 RSPO2Q6UXX9 243 aaPredicted RBP21.89■■□□□ 1.09
CHD3-204ENST00000439235 H2AFVQ71UI9 128 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 SPRED2Q7Z698 418 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 PHF13Q86YI8 300 aaPredicted RBP21.89■■□□□ 1.09
CHD3-204ENST00000439235 IPO4Q8TEX9 1081 aaKnown RBP21.89■■□□□ 1.09
CHD3-204ENST00000439235 STK32AQ8WU08 396 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 CPA5Q8WXQ8 436 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 CLSTN3Q9BQT9 956 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 MIS12Q9H081 205 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 RXFP1Q9HBX9 757 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 NGRNQ9NPE2 291 aaKnown RBP21.89■■□□□ 1.09
CHD3-204ENST00000439235 ABI2Q9NYB9 513 aaPredicted RBP21.89■■□□□ 1.09
CHD3-204ENST00000439235 PPP2R2CQ9Y2T4 447 aa21.89■■□□□ 1.09
CHD3-204ENST00000439235 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 MTMR11A4FU01 709 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 ANKRD62A6NC57 917 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 H3BNC9 293 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 XPO1O14980 1071 aaKnown RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 CXCL14O95715 111 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 RPL17P18621 184 aaKnown RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 C1QBPQ07021 282 aaKnown RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 TPGS2Q68CL5 300 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 PDE12Q6L8Q7 609 aaKnown RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 VSTM1Q6UX27 236 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 ERICH1Q86X53 443 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 WDTC1Q8N5D0 677 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 AUTS2Q8WXX7 1259 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 CTNNBL1Q8WYA6 563 aaPredicted RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 TIFAQ96CG3 184 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 EMILIN2Q9BXX0 1053 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 DMAP1Q9NPF5 467 aaPredicted RBP21.88■■□□□ 1.09
CHD3-204ENST00000439235 IRAK3Q9Y616 596 aa21.88■■□□□ 1.09
CHD3-204ENST00000439235 LILRB3O75022 631 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 CALB1P05937 261 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 MYBL1P10243 752 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 MMP8P22894 467 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 BDNFP23560 247 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 MAGEA11P43364 429 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 PLA2G4AP47712 749 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 RAB33AQ14088 237 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 LIN9Q5TKA1 542 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 CLEC20AQ6ZU45 233 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 MON1BQ7L1V2 547 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 KIAA1524Q8TCG1 905 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 SLC35F5Q8WV83 523 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 VCPIP1Q96JH7 1222 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 PGLYRP2Q96PD5 576 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 C11orf70Q9BRQ4 267 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 TSGA10Q9BZW7 698 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 LMAN2LQ9H0V9 348 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 CSNK1G1Q9HCP0 422 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 CYLDQ9NQC7 956 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 ADAM22Q9P0K1 906 aa21.87■■□□□ 1.09
CHD3-204ENST00000439235 AFF4Q9UHB7 1163 aaKnown RBP21.87■■□□□ 1.09
CHD3-204ENST00000439235 PLXNA4Q9HCM2 1894 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 WDR27A2RRH5 827 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 FSCN2O14926 492 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 GRM6O15303 877 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ADAM12O43184 909 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ADH1AP07327 375 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 TMEM253P0C7T8 217 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ABCB4P21439 1286 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ACADSBP45954 432 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 GALCP54803 685 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ERVFC1P60507 584 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 PTPN20Q4JDL3 420 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 PLPP4Q5VZY2 271 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 RNF19BQ6ZMZ0 732 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 MMS22LQ6ZRQ5 1243 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ZSCAN30Q86W11 494 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 MCOLN2Q8IZK6 566 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 ZNF653Q96CK0 615 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 PPP1R13BQ96KQ4 1090 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 HSFY1Q96LI6 401 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 SMOQ99835 787 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 UBXN6Q9BZV1 441 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 SYNCQ9H7C4 482 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 PNPLA8Q9NP80 782 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 CYTH4Q9UIA0 394 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 STRIP2Q9ULQ0 834 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 MAFFQ9ULX9 164 aa21.86■■□□□ 1.09
CHD3-204ENST00000439235 GOLGA6L9A6NEM1 432 aa21.85■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms