RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PCDH15Q96QU1 1955 aa12.08□□□□□ -0.48
CSTF3-203ENST00000438862 PHLPP2Q6ZVD8 1323 aa12.08□□□□□ -0.48
CSTF3-203ENST00000438862 ATXN2Q99700 1313 aaKnown RBP12.08□□□□□ -0.48
CSTF3-203ENST00000438862 ARHGEF35A5YM69 484 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 GJB3O75712 270 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 S1PR4O95977 384 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 ATF6P18850 670 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 CYP3A5P20815 502 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 TXKP42681 527 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 ABCG1P45844 678 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 SEC13P55735 322 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 FAM160A1Q05DH4 1040 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 SMARCB1Q12824 385 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 ANKRD1Q15327 319 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 EML3Q32P44 896 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 SLC10A6Q3KNW5 377 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 TXNDC8Q6A555 127 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 TMEM150AQ86TG1 271 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 SLCO6A1Q86UG4 719 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 FRMD1Q8N878 549 aa12.07□□□□□ -0.48
CSTF3-203ENST00000438862 ZNF775Q96BV0 537 aaPredicted RBP12.07□□□□□ -0.48
CSTF3-203ENST00000438862 BCCIPQ9P287 314 aaKnown RBP eCLIP12.07□□□□□ -0.48
CSTF3-203ENST00000438862 A0A1W2PQD8 194 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 RCCD1A6NED2 376 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 TRABD2BA6NFA1 517 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 J3QKU1 62 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 CAPN9O14815 690 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 PROZP22891 400 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 ZNF33AQ06730 810 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 CYP4F3Q08477 520 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 DMP1Q13316 513 aaPredicted RBP12.06□□□□□ -0.48
CSTF3-203ENST00000438862 EOGTQ5NDL2 527 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 MPZL3Q6UWV2 235 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 LIAT1Q6ZQX7 453 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 PGBD3Q8N328 593 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 RIN3Q8TB24 985 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 SPPL2BQ8TCT7 592 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 GIPC2Q8TF65 315 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 CRELD1Q96HD1 420 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 PLEKHA5Q9HAU0 1116 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 TUBGCP4Q9UGJ1 667 aa12.06□□□□□ -0.48
CSTF3-203ENST00000438862 XPOTO43592 962 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 NFATC1O95644 943 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 USP17L7P0C7H9 530 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ODC1P11926 461 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 HNRNPLP14866 589 aaKnown RBP eCLIP12.05□□□□□ -0.482e-6■■□□□ 12
CSTF3-203ENST00000438862 HMGA1P17096 107 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 NMT1P30419 496 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 NEK4P51957 841 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 RPL6Q02878 288 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ZBTB6Q15916 424 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ZNF77Q15935 545 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 SLC39A12Q504Y0 691 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 EFCAB13Q8IY85 973 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 GALNT15Q8N3T1 639 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ZNF843Q8N446 348 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 TXNDC5Q8NBS9 432 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 OR2I1PQ8NGU4 316 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ZNF274Q96GC6 653 aaPredicted RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 TARS2Q9BW92 718 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ZDHHC5Q9C0B5 715 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 TMEM206Q9H813 350 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 PDRG1Q9NUG6 133 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 UBQLN1Q9UMX0 589 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 RBM19Q9Y4C8 960 aaKnown RBP12.05□□□□□ -0.48
CSTF3-203ENST00000438862 WNT6Q9Y6F9 365 aa12.05□□□□□ -0.48
CSTF3-203ENST00000438862 OBSL1O75147 1896 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 MYMKA6NI61 221 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 CCDC169A6NNP5 214 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 E9PAM4 449 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 ABLIM1O14639 778 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 CBFA2T3O75081 653 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 MED24O75448 989 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 CSH1P0DML2 217 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 CSH2P0DML3 217 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 HAPLN1P10915 354 aaPredicted RBP12.04□□□□□ -0.48
CSTF3-203ENST00000438862 MUTP22033 750 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 RPA1P27694 616 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 OPRD1P41143 372 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 LILRA4P59901 499 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 EARS2Q5JPH6 523 aaKnown RBP12.04□□□□□ -0.48
CSTF3-203ENST00000438862 ALLCQ8N6M5 410 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 IL17RCQ8NAC3 791 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 HMGB4Q8WW32 186 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 SNX21Q969T3 373 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 SENP8Q96LD8 212 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 MTMR9Q96QG7 549 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 TSPAN18Q96SJ8 248 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 PI4K2AQ9BTU6 479 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 UXTQ9UBK9 157 aaPredicted RBP12.04□□□□□ -0.48
CSTF3-203ENST00000438862 SUSD2Q9UGT4 822 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
CSTF3-203ENST00000438862 A0A0A0MRY4 1105 aa12.03□□□□□ -0.48
CSTF3-203ENST00000438862 TRAV19A0A0A6YYK7 116 aa12.03□□□□□ -0.48
CSTF3-203ENST00000438862 SGK1O00141 431 aa12.03□□□□□ -0.48
CSTF3-203ENST00000438862 NEMFO60524 1076 aa12.03□□□□□ -0.48
CSTF3-203ENST00000438862 TOM1L1O75674 476 aa12.03□□□□□ -0.48
CSTF3-203ENST00000438862 KLF8O95600 359 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms