RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 MPPED1O15442 326 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 RGS10O43665 173 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 ORC4O43929 436 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 SETSIPP0DME0 302 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 IDEP14735 1019 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 TSHRP16473 764 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 TNFRSF1AP19438 455 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 TACR2P21452 398 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 FGFR2P21802 821 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 FOLR3P41439 243 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 HTRA4P83105 476 aaPredicted RBP4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 SCAPQ12770 1279 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 MYO1EQ12965 1108 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 NPY5RQ15761 445 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 USP17L6PQ6QN14 398 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 KRT28Q7Z3Y7 464 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 SLC15A3Q8IY34 581 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 RNF152Q8N8N0 203 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 TOR1AIP2Q8NFQ8 470 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 BPIFB1Q8TDL5 484 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 SSH3Q8TE77 659 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 ASB10Q8WXI3 467 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 CAVIN3Q969G5 261 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 FBXL20Q96IG2 436 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 SGCZQ96LD1 299 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 Q96MF0 132 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 MLST8Q9BVC4 326 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 ALG8Q9BVK2 526 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 ACTRT3Q9BYD9 372 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 CERS4Q9HA82 394 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 MID2Q9UJV3 735 aa4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.55□□□□□ -1.68
LSM1P1-201ENST00000438629 COL4A3Q01955 1670 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 A0A1W2PPC4 97 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 CCDC151A5D8V7 595 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 RAB27BO00194 218 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 ESRRBO95718 433 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 ONECUT2O95948 504 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 MYL4P12829 197 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 IL1R1P14778 569 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 PPP3CBP16298 524 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 KCNA3P22001 575 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 PTDSS1P48651 473 aaKnown RBP4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 PDE6CP51160 858 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 MPP3Q13368 585 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 CCNIQ14094 377 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 RGS7BPQ6MZT1 257 aaPredicted RBP4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 HIBCHQ6NVY1 386 aaPredicted RBP4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 ZDHHC24Q6UX98 284 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 Q6ZNX1 250 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 KRT73Q86Y46 540 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 ZNF280BQ86YH2 543 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 LIX1LQ8IVB5 337 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 TXLNBQ8N3L3 684 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 VGLL2Q8N8G2 317 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 ATRIPQ8WXE1 791 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 ZNF668Q96K58 619 aaPredicted RBP4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 MAGEB5Q9BZ81 275 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 TRIM5Q9C035 493 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 TBC1D23Q9NUY8 699 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 LRCH1Q9Y2L9 728 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 CDY1Q9Y6F8 540 aa4.54□□□□□ -1.68
LSM1P1-201ENST00000438629 hCG_1984214I3L0E3 225 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 SLC16A3O15427 465 aaKnown RBP4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 PEX14O75381 377 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 RHOBTB3O94955 611 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 NXPH3O95157 252 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 RASAL1O95294 804 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 A1BGP04217 495 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 C6P13671 934 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 BMPR2Q13873 1038 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 PLAC9Q5JTB6 97 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 CERCAMQ5T4B2 595 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 VPS53Q5VIR6 699 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 CACHD1Q5VU97 1274 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 PLAG1Q6DJT9 500 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 RAB11FIP4Q86YS3 637 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 FANCBQ8NB91 859 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 OSCP1Q8WVF1 389 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 LPIN2Q92539 896 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 ZNF566Q969W8 418 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 FKBP10Q96AY3 582 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 SLC39A13Q96H72 371 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 CXorf36Q9H7Y0 433 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 HEYLQ9NQ87 328 aaPredicted RBP4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 EHD3Q9NZN3 535 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 LRIT1Q9P2V4 623 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 DKK4Q9UBT3 224 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 SERTAD3Q9UJW9 196 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 SH2B3Q9UQQ2 575 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 SSX2IPQ9Y2D8 614 aa4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 MRPS17Q9Y2R5 130 aaKnown RBP4.53□□□□□ -1.68
LSM1P1-201ENST00000438629 H7C4K7 107 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 RRP9O43818 475 aaKnown RBP4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 PIAS2O75928 621 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 EPHA3P29320 983 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 TECP42680 631 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 GDF5P43026 501 aa4.52□□□□□ -1.69
LSM1P1-201ENST00000438629 ALDH9A1P49189 494 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms