RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 DENND5BQ6ZUT9 1274 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 GAREM2Q75VX8 874 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 SLC44A3Q8N4M1 653 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 LMO3Q8TAP4 145 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 CYFIP2Q96F07 1278 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 TRMT2BQ96GJ1 504 aaKnown RBP17.39■□□□□ 0.37
CTSD-205ENST00000438213 SMARCD1Q96GM5 515 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 MYRFLQ96LU7 910 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 NAT10Q9H0A0 1025 aaKnown RBP17.39■□□□□ 0.37
CTSD-205ENST00000438213 HMGXB4Q9UGU5 601 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 NFE2L3Q9Y4A8 694 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 DOCK8Q8NF50 2099 aa17.39■□□□□ 0.37
CTSD-205ENST00000438213 SOBPA7XYQ1 873 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 F8VP50 259 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 ORC1Q13415 861 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 SKOR2Q2VWA4 1001 aaPredicted RBP17.38■□□□□ 0.37
CTSD-205ENST00000438213 ZNF394Q53GI3 561 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 PARM1Q6UWI2 310 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 GBP6Q6ZN66 633 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 FAM35AQ86V20 835 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 FUKQ8N0W3 1084 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 PPM1KQ8N3J5 372 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 C12orf29Q8N999 325 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 SLC2A14Q8TDB8 520 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 WHAMMQ8TF30 809 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 RSAD2Q8WXG1 361 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 MRPS31Q92665 395 aaKnown RBP17.38■□□□□ 0.37
CTSD-205ENST00000438213 SMARCD2Q92925 531 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 E2F7Q96AV8 911 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 TMEM176AQ96HP8 235 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 TWNKQ96RR1 684 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 HNRNPABQ99729 332 aaKnown RBP17.38■□□□□ 0.37
CTSD-205ENST00000438213 TUBGCP2Q9BSJ2 902 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 TASP1Q9H6P5 420 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 IL21Q9HBE4 155 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 ZFP14Q9HCL3 533 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 DMAP1Q9NPF5 467 aaPredicted RBP17.38■□□□□ 0.37
CTSD-205ENST00000438213 NUMBLQ9Y6R0 609 aa17.38■□□□□ 0.37
CTSD-205ENST00000438213 GTPBP10A4D1E9 387 aaKnown RBP17.37■□□□□ 0.37
CTSD-205ENST00000438213 KCNJ18B7U540 433 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 AP1G2O75843 785 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 F11P03951 625 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 TPM2P07951 284 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 CCDC130P13994 396 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 DDX6P26196 483 aaKnown RBP eCLIP17.37■□□□□ 0.37
CTSD-205ENST00000438213 EEF1GP26641 437 aaKnown RBP17.37■□□□□ 0.37
CTSD-205ENST00000438213 TYRO3Q06418 890 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 KCNJ12Q14500 433 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 FAM78AQ5JUQ0 283 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 GPR158Q5T848 1215 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 PAQR9Q6ZVX9 377 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 FGF14Q92915 247 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 ELSPBP1Q96BH3 223 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 FAM81BQ96LP2 452 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 ASB16Q96NS5 453 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 ARID3AQ99856 593 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 INTS2Q9H0H0 1204 aaKnown RBP17.37■□□□□ 0.37
CTSD-205ENST00000438213 NDST4Q9H3R1 872 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 SAMSN1Q9NSI8 373 aaKnown RBP17.37■□□□□ 0.37
CTSD-205ENST00000438213 FAM49BQ9NUQ9 324 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 GCNT4Q9P109 453 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 KIAA1257Q9ULG3 409 aa17.37■□□□□ 0.37
CTSD-205ENST00000438213 ECI2O75521 394 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 RTN3O95197 1032 aaPredicted RBP17.36■□□□□ 0.37
CTSD-205ENST00000438213 FAM200BP0CF97 657 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 ADORA2BP29275 332 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 PPP3CCP48454 512 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 RAD23BP54727 409 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 GCNT1Q02742 428 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 SIGLEC14Q08ET2 396 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 EXOC3L4Q17RC7 722 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 VWA3BQ502W6 1294 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 HSP90AA4PQ58FG1 418 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 TCP11X2Q5H9J9 407 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 TRIM67Q6ZTA4 783 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 NUP93Q8N1F7 819 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 SLC4A11Q8NBS3 891 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 ZSCAN18Q8TBC5 510 aaPredicted RBP17.36■□□□□ 0.37
CTSD-205ENST00000438213 JAKMIP2Q96AA8 810 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 ZSWIM3Q96MP5 696 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 KCNK16Q96T55 309 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 CRACR2AQ9BSW2 395 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 TRPV4Q9HBA0 871 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 KRT82Q9NSB4 513 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 COMMD8Q9NX08 183 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 PCDHB4Q9Y5E5 795 aa17.36■□□□□ 0.37
CTSD-205ENST00000438213 PES1O00541 588 aaKnown RBP17.35■□□□□ 0.37
CTSD-205ENST00000438213 DPYSL4O14531 572 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 GPR37L1O60883 481 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 WEE1P30291 646 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 CACNA2D1P54289 1103 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 SLC8A3P57103 927 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 MYL5Q02045 173 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 TANGO2Q6ICL3 276 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 C11orf57Q6ZUT1 292 aaPredicted RBP17.35■□□□□ 0.37
CTSD-205ENST00000438213 RRAGAQ7L523 313 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 ENOSF1Q7L5Y1 443 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 ARID3BQ8IVW6 561 aaPredicted RBP17.35■□□□□ 0.37
CTSD-205ENST00000438213 STKLD1Q8NE28 680 aa17.35■□□□□ 0.37
CTSD-205ENST00000438213 ANKRD20A12PQ8NF67 263 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms