RNA–Protein interactions for RNA: ENST00000437929.5

TOP3B-208, Transcript of DNA topoisomerase III beta, humanhuman

TSL 4

Gene TOP3B, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-208ENST00000437929 C12orf50Q8NA57 414 aaPredicted RBP7.56□□□□□ -1.2
TOP3B-208ENST00000437929 STK35Q8TDR2 534 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 DDX1Q92499 740 aaKnown RBP7.56□□□□□ -1.2
TOP3B-208ENST00000437929 HAS1Q92839 578 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 TRIM11Q96F44 468 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 KLHDC7BQ96G42 594 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 FAM20AQ96MK3 541 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 CCDC43Q96MW1 224 aaKnown RBP7.56□□□□□ -1.2
TOP3B-208ENST00000437929 IER2Q9BTL4 223 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 RSRP1Q9BUV0 290 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 POLR3FQ9H1D9 316 aaPredicted RBP7.56□□□□□ -1.2
TOP3B-208ENST00000437929 ACBD3Q9H3P7 528 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 PDZD7Q9H5P4 517 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 ZSWIM4Q9H7M6 989 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 GPRC5CQ9NQ84 441 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 GDAQ9Y2T3 454 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 ZMYM2Q9UBW7 1377 aa7.56□□□□□ -1.2
TOP3B-208ENST00000437929 CCDC194A0A1B0GVG4 234 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 FAM229AH3BQW9 127 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 TM4SF5O14894 197 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 ZNF263O14978 683 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 USO1O60763 962 aaKnown RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SLITRK3O94933 977 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 KCNK5O95279 499 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SEC24AO95486 1093 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 EDN1P05305 212 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 PROS1P07225 676 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 MYL4P12829 197 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SPINK2P20155 84 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 PDIA3P30101 505 aaKnown RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 ELF1P32519 619 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 PXNP49023 591 aaPredicted RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 KPNA1P52294 538 aaPredicted RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SHC2P98077 582 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 POU5F1BQ06416 359 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SSRP1Q08945 709 aaKnown RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SPIRE1Q08AE8 756 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 ACAP1Q15027 740 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SETDB1Q15047 1291 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 STPG1Q5TH74 334 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 BLOC1S2Q6QNY1 142 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 CD300LGQ6UXG3 332 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 UNQ6494/PRO21346Q6UXR6 183 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 PIK3AP1Q6ZUJ8 805 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 NEK8Q86SG6 692 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SPEM1Q8N4L4 309 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 ZSCAN18Q8TBC5 510 aaPredicted RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 CSGALNACT1Q8TDX6 532 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 PIGOQ8TEQ8 1089 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SMARCD2Q92925 531 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 KCNB2Q92953 911 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 RSPRY1Q96DX4 576 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 YTHDC1Q96MU7 727 aaKnown RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 TMEM74Q96NL1 305 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 NFKBIZQ9BYH8 718 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SLITRK6Q9H5Y7 841 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 SOX17Q9H6I2 414 aaPredicted RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 CYP4F11Q9HBI6 524 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 OSGEPQ9NPF4 335 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 MKL2Q9ULH7 1088 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 PDCD11Q14690 1871 aaKnown RBP7.55□□□□□ -1.2
TOP3B-208ENST00000437929 ZZEF1O43149 2961 aa7.55□□□□□ -1.2
TOP3B-208ENST00000437929 A0A0A0MRY4 1105 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 ARHGEF37A1IGU5 675 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 HEPACAM2A8MVW5 462 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 ARNTLO00327 626 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 ZNF197O14709 1029 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 GNB5O14775 395 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 DDX3YO15523 660 aaKnown RBP7.54□□□□□ -1.2
TOP3B-208ENST00000437929 MOSPD3O75425 235 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 DEXIO95424 95 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 RPS6KB1P23443 525 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 ARNTP27540 789 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 CNR2P34972 360 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 RARRES1P49788 294 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 LIMK1P53667 647 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 TWF1Q12792 350 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 STK3Q13188 491 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 LRRC32Q14392 662 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 SUZ12Q15022 739 aaKnown RBP7.54□□□□□ -1.2
TOP3B-208ENST00000437929 PON2Q15165 354 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 POU4F3Q15319 338 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 TEAD2Q15562 447 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 EARS2Q5JPH6 523 aaKnown RBP7.54□□□□□ -1.2
TOP3B-208ENST00000437929 SNAP47Q5SQN1 464 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 EEF1DP3Q658K8 133 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 TCEAL6Q6IPX3 200 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 ANKS3Q6ZW76 656 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 KBTBD6Q86V97 674 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 YAF2Q8IY57 180 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 DAGLBQ8NCG7 672 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 GALNT11Q8NCW6 608 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 PHC3Q8NDX5 983 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 ZNF461Q8TAF7 563 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 GRIN3AQ8TCU5 1115 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 DEPDC1BQ8WUY9 529 aa7.54□□□□□ -1.2
TOP3B-208ENST00000437929 TCEAL3Q969E4 200 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms