RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 CHMP2BQ9UQN3 213 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 PPP1R3GB7ZBB8 358 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 RHOBTB1O94844 696 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 C9orf131Q5VYM1 1079 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 MRNIPQ6NTE8 343 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 CYFIP2Q96F07 1278 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 DCDC2Q9UHG0 476 aa16.48■□□□□ 0.23
PTPN13-204ENST00000436978 NPM3O75607 178 aaKnown RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 HORMAD1Q86X24 394 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 FAM71DQ8N9W8 422 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 USP38Q8NB14 1042 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 ERP44Q9BS26 406 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 CCDC78A2IDD5 438 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 DDIT4Q9NX09 232 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 GTF3C4Q9UKN8 822 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 USP15Q9Y4E8 981 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 C16orf96A6NNT2 1141 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 B3GAT3O94766 335 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 ITGA8P53708 1063 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 TMA16Q96EY4 203 aaKnown RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 TRIM16O95361 564 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 KCNK10P57789 538 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 SOCS4Q8WXH5 440 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 ISCUQ9H1K1 167 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 ASS1P00966 412 aaKnown RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 SERPINB8P50452 374 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 SYCP2LQ5T4T6 812 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 SMIM5Q71RC9 77 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 ADGRE3Q9BY15 652 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 PDGFCQ9NRA1 345 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 VWA5AO00534 786 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 TGM2P21980 687 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 C6orf10Q5SRN2 563 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 FAM9CQ8IZT9 166 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 C1orf131Q8NDD1 294 aaKnown RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 ALG6Q9Y672 507 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 E4F1Q66K89 784 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 FBXO16Q8IX29 292 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 RBBP8Q99708 897 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 APOL5Q9BWW9 433 aa16.47■□□□□ 0.23
PTPN13-204ENST00000436978 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.47■□□□□ 0.23
PTPN13-204ENST00000436978 FKBP1AP62942 108 aaKnown RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 AGGF1Q8N302 714 aaeCLIP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 B4GALNT2Q8NHY0 566 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 RTFDC1Q9BY42 306 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 NCAM2O15394 837 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 EPHB2P29323 1055 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 COILP38432 576 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 CTCFP49711 727 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 KDSRQ06136 332 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 ELAVL2Q12926 359 aaKnown RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 RIN2Q8WYP3 895 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 TADA1Q96BN2 335 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 CARD9Q9H257 536 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 WHRNQ9P202 907 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 ATMINO43313 823 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 NUP93Q8N1F7 819 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 MTG1Q9BT17 334 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 PDLIM2Q96JY6 352 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 MANSC4A6NHS7 340 aaPredicted RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 CHRM3P20309 590 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 TROAPQ12815 778 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 TLR8Q9NR97 1041 aaKnown RBP16.46■□□□□ 0.23
PTPN13-204ENST00000436978 DLG5Q8TDM6 1919 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 EVPLLA8MZ36 301 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 GUCY1A3Q02108 690 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 CLEC16AQ2KHT3 1053 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 PHF21AQ96BD5 680 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 SERPINB12Q96P63 405 aa16.46■□□□□ 0.23
PTPN13-204ENST00000436978 ADGRB1O14514 1584 aa16.46■□□□□ 0.22
PTPN13-204ENST00000436978 MBL2P11226 248 aaPredicted RBP16.46■□□□□ 0.22
PTPN13-204ENST00000436978 CNTFP26441 200 aa16.46■□□□□ 0.22
PTPN13-204ENST00000436978 KBTBD12Q3ZCT8 623 aa16.46■□□□□ 0.22
PTPN13-204ENST00000436978 ABTB1Q969K4 478 aaPredicted RBP16.46■□□□□ 0.22
PTPN13-204ENST00000436978 WWOXQ9NZC7 414 aa16.46■□□□□ 0.22
PTPN13-204ENST00000436978 KLK14Q9P0G3 267 aa16.46■□□□□ 0.22
PTPN13-204ENST00000436978 UBR1Q8IWV7 1749 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 CACHD1Q5VU97 1274 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 METTL7BQ6UX53 244 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 COL23A1Q86Y22 540 aaPredicted RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 DRG1Q9Y295 367 aaKnown RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 MAPK1P28482 360 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 KLK7P49862 253 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 TSEN34Q9BSV6 310 aaKnown RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 RNF112Q9ULX5 631 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 FAM107AO95990 144 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 GSNP06396 782 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 RBP3P10745 1247 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 CCZ1BP86790 482 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 CCZ1P86791 482 aaPredicted RBP16.45■□□□□ 0.22
PTPN13-204ENST00000436978 ANKS1AQ92625 1134 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 STAMBPL1Q96FJ0 436 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 ZFP42Q96MM3 310 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 FAM167BQ9BTA0 163 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 MANSC1Q9H8J5 431 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 CRTAMO95727 393 aa16.45■□□□□ 0.22
PTPN13-204ENST00000436978 NAT9Q9BTE0 207 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms