RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ZNF263O14978 683 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 SPINT1O43278 529 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 HCRTO43612 131 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 CILPO75339 1184 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TACC1O75410 805 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 KIF4AO95239 1232 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 LCA5LO95447 670 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM163BP0C2L3 166 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 CCDC172P0C7W6 258 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM228BP0C875 321 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 WARSP23381 471 aaKnown RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 BRCC3P46736 316 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 OR1G1P47890 313 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC11A1P49279 550 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 NDST1P52848 882 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 YWHAEP62258 255 aaKnown RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 ORC1Q13415 861 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 ZNF394Q53GI3 561 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 WSCD1Q658N2 575 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM117BQ6P1L5 589 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 PSRC1Q6PGN9 363 aaPredicted RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 XKR5Q6UX68 686 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 DSTYKQ6XUX3 929 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TOGARAM2Q6ZUX3 1019 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 DPH6Q7L8W6 267 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FMNL3Q8IVF7 1028 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 CCDC170Q8IYT3 715 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 LRRC43Q8N309 656 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 PDCL2Q8N4E4 241 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TOP6BLQ8N6T0 577 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 SLC4A11Q8NBS3 891 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 APPL2Q8NEU8 664 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 LNX1Q8TBB1 728 aaPredicted RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 KIAA1524Q8TCG1 905 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 HASPINQ8TF76 798 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 RSPH1Q8WYR4 309 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 HERVK_113Q902F9 699 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TFAP2BQ92481 460 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM176AQ96HP8 235 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 SENP8Q96LD8 212 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 CCDC42Q96M95 316 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM193BQ96PV7 902 aaPredicted RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 PCDHB18PQ96TA0 734 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 AGPAT1Q99943 283 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 MRPL9Q9BYD2 267 aaKnown RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TGIF2Q9GZN2 237 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FAM124BQ9H5Z6 455 aaPredicted RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 CWH43Q9H720 699 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 SPTLC3Q9NUV7 552 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 MARCH5Q9NX47 278 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 TOR4AQ9NXH8 423 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 ADAMTS1Q9UHI8 967 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 NENFQ9UMX5 172 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 FNDC3AQ9Y2H6 1198 aaKnown RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 ZKSCAN5Q9Y2L8 839 aa7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 REXO2Q9Y3B8 237 aaKnown RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 EPN1Q9Y6I3 576 aaPredicted RBP7.49□□□□□ -1.21
LSM3P3-201ENST00000436601 EIF3CLB5ME19 914 aaKnown RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 M0QZQ0 153 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 GIPC1O14908 333 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 AKR1B10O60218 316 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 GDF9O60383 454 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 HUS1O60921 280 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 NDUFA10O95299 355 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 EFEMP2O95967 443 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 ALDH2P05091 517 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 GALTP07902 379 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 MMEP08473 750 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 PAEPP09466 180 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 PAX3P23760 479 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 LMO2P25791 158 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 ANXA13P27216 316 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 GNL1P36915 607 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 PBX3P40426 434 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 KCNJ6P48051 423 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 KIF11P52732 1056 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 BPIFB4P59827 614 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 HTRA4P83105 476 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 FMO1Q01740 532 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 CDR2Q01850 454 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 CYP27A1Q02318 531 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 GFPT1Q06210 699 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TDRD12Q587J7 1177 aaKnown RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 RASIP1Q5U651 963 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 KIAA0319Q5VV43 1072 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TAF3Q5VWG9 929 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 UNC93AQ86WB7 457 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 OSTM1Q86WC4 334 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TMEM173Q86WV6 379 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 PALB2Q86YC2 1186 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 CMTR2Q8IYT2 770 aaKnown RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 ADGRF2Q8IZF7 708 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 C17orf53Q8N3J3 647 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 TTC39CQ8N584 583 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 ACRBPQ8NEB7 543 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 OR6B3Q8NGW1 331 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 BCL7CQ8WUZ0 217 aaPredicted RBP7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 KAT6AQ92794 2004 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 SUSD3Q96L08 255 aa7.48□□□□□ -1.21
LSM3P3-201ENST00000436601 EIF3CQ99613 913 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms