RNA–Protein interactions for RNA: ENST00000436368.6

RBFOX1-205, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-205ENST00000436368 FHDC1Q9C0D6 1143 aaPredicted RBP16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 PDZD7Q9H5P4 517 aa16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 PLEKHA5Q9HAU0 1116 aa16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 SLC40A1Q9NP59 571 aa16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 KLC4Q9NSK0 619 aa16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 KLHL14Q9P2G3 628 aa16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 PTPRFP10586 1907 aa16.49■□□□□ 0.23
RBFOX1-205ENST00000436368 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 C3orf70A6NLC5 250 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 PRPSAP2O60256 369 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 TOMM70O94826 608 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 INSRRP14616 1297 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 GEMIN4P57678 1058 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 ROR1Q01973 937 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 PDIA2Q13087 525 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 PDK2Q15119 407 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 ATP13A4Q4VNC1 1196 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 ZC3H12AQ5D1E8 599 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 FAM102AQ5T9C2 384 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 FBXW10Q5XX13 1052 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 RGS9BPQ6ZS82 235 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 TRABD2AQ86V40 505 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 ZDHHC17Q8IUH5 632 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 CMASQ8NFW8 434 aaPredicted RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 PYROXD1Q8WU10 500 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 USP6NLQ92738 828 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 KAT2BQ92831 832 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 HAUS1Q96CS2 278 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 OPTNQ96CV9 577 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 HEXIM2Q96MH2 286 aaKnown RBP16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 TBCBQ99426 244 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 NT5C1AQ9BXI3 368 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 TRABDQ9H4I3 376 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 EURLQ9NYK6 297 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 SLC12A4Q9UP95 1085 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 SLC45A1Q9Y2W3 748 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 OTOFQ9HC10 1997 aa16.48■□□□□ 0.23
RBFOX1-205ENST00000436368 DICER1Q9UPY3 1922 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 RBM47A0AV96 593 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 ZNF487B1APH4 448 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 GPR25O00155 361 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 STRNO43815 780 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 RASSF9O75901 435 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 ZWINTO95229 277 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 RAP1GAPP47736 663 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 CTCFP49711 727 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 EIF3EP60228 445 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 RNASELQ05823 741 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 ACVR2BQ13705 512 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 SNCBQ16143 134 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 SEPT7Q16181 437 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 EFHC2Q5JST6 749 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 UBAP2Q5T6F2 1119 aaKnown RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 LCLAT1Q6UWP7 414 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 LINC01465Q8N7H1 131 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 GPRC5AQ8NFJ5 357 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 NLGN2Q8NFZ4 835 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 TRAPPC12Q8WVT3 735 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 TEKT4Q8WW24 435 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 NLRP7Q8WX94 980 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 MAML1Q92585 1016 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 TSPAN18Q96SJ8 248 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 CPXM1Q96SM3 734 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 TMEM121Q9BTD3 319 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 SMYD3Q9H7B4 428 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 TXNRD2Q9NNW7 524 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 USP18Q9UMW8 372 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 AGAP1Q9UPQ3 857 aa16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 FARP1Q9Y4F1 1045 aaPredicted RBP16.47■□□□□ 0.23
RBFOX1-205ENST00000436368 DPYSL4O14531 572 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 CHUKO15111 745 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 ZNF189O75820 626 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 DDNO94850 711 aaPredicted RBP16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 TRUB2O95900 331 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 ERBB2P04626 1255 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 TCF4P15884 667 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 ALDH3A1P30838 453 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 GRM5P41594 1212 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 IGBP1P78318 339 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 CCDC15Q0P6D6 951 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 KRT81Q14533 505 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 MTFR1Q15390 333 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 CCDC142Q17RM4 750 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 BOLA3Q53S33 107 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 RNF43Q68DV7 783 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 CCDC63Q8NA47 563 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 JOSD2Q8TAC2 188 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 FBF1Q8TES7 1133 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 ELOVL4Q9GZR5 314 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 FGFR1OP2Q9NVK5 253 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 DPP3Q9NY33 737 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 CTNNAL1Q9UBT7 734 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 HESX1Q9UBX0 185 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 TBK1Q9UHD2 729 aa16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.46■□□□□ 0.23
RBFOX1-205ENST00000436368 A0A087WZ62 844 aa16.45■□□□□ 0.22
RBFOX1-205ENST00000436368 RRN3P2A6NIE6 340 aa16.45■□□□□ 0.22
RBFOX1-205ENST00000436368 PEX10O60683 326 aa16.45■□□□□ 0.22
RBFOX1-205ENST00000436368 ATP5HO75947 161 aa16.45■□□□□ 0.22
RBFOX1-205ENST00000436368 TGM2P21980 687 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms