RNA–Protein interactions for RNA: ENST00000435914.1

PNKDP1-201, Transcript of PNKD pseudogene 1, humanhuman

BASIC

Gene PNKDP1, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKDP1-201ENST00000435914 SEMA4GQ9NTN9 838 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 THG1LQ9NWX6 298 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 HSPBP1Q9NZL4 362 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 GMEB2Q9UKD1 530 aa6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 CNOT1A5YKK6 2376 aaKnown RBP6.62□□□□□ -1.35
PNKDP1-201ENST00000435914 C2orf78A6NCI8 922 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 ANTXRLA6NF34 631 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SLC30A4O14863 429 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 TM4SF5O14894 197 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 CUTAO60888 179 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 RNF40O75150 1001 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 TACC1O75410 805 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 EGFP01133 1207 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 KRT19P08727 400 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 FAM163BP0C2L3 166 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 TMEM191BP0C7N4 346 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SDHBP21912 280 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 CASP1P29466 404 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 RAP1GAPP47736 663 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 GALK1P51570 392 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 CACNA2D1P54289 1103 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 PSMC1P62191 440 aaKnown RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 MTF1Q14872 753 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 PSMD6Q15008 389 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 PDGFRLQ15198 375 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 STK38Q15208 465 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SURF1Q15526 300 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 TAF12Q16514 161 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 CSRP2Q16527 193 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SNRNP35Q16560 246 aaKnown RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 DUOXA2Q1HG44 320 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 FAM26FQ5R3K3 315 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 HEATR6Q6AI08 1181 aaKnown RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 VSTM1Q6UX27 236 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 PRR23CQ6ZRP0 262 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 C12orf56Q8IXR9 622 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 FAM160A2Q8N612 972 aaPredicted RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 ARL14EPQ8N8R7 260 aaPredicted RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 MYCBPAPQ8TBZ2 947 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 PLEKHO2Q8TD55 490 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 TMEM174Q8WUU8 243 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 OSCP1Q8WVF1 389 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 GAB3Q8WWW8 586 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 ZNF516Q92618 1163 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SECISBP2LQ93073 1101 aaKnown RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SNX21Q969T3 373 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 MYLPFQ96A32 169 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 PCED1BQ96HM7 432 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 ANKRD36BP1Q96IX9 119 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 SYT15Q9BQS2 421 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 MRPL45Q9BRJ2 306 aaKnown RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 RTKNQ9BST9 563 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 XYLT2Q9H1B5 865 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 ECT2Q9H8V3 914 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 KIAA1586Q9HCI6 787 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 POLR3BQ9NW08 1133 aaPredicted RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 TFIP11Q9UBB9 837 aaKnown RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 UXTQ9UBK9 157 aaPredicted RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 CDH9Q9ULB4 789 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 USP18Q9UMW8 372 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 ARHGAP26Q9UNA1 814 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 MAGED2Q9UNF1 606 aaPredicted RBP6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 CHD8Q9HCK8 2581 aa6.61□□□□□ -1.35
PNKDP1-201ENST00000435914 UBE4BO95155 1302 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 TRAV19A0A0A6YYK7 116 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 DCDC2BA2VCK2 349 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 ZNF840PA6NDX5 716 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 KLRC4O43908 158 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 GDF9O60383 454 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 AKAP3O75969 853 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 OAS1P00973 400 aaKnown RBP6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 TNNC2P02585 160 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 USP17L7P0C7H9 530 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 PFKLP17858 780 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 DRD1P21728 446 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 BDNFP23560 247 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 OPRD1P41143 372 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 PXNP49023 591 aaPredicted RBP6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 SNRPFP62306 86 aaKnown RBP6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 NOP14P78316 857 aaKnown RBP6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 CLDN10P78369 228 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 CYP24A1Q07973 514 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 GRSF1Q12849 480 aaKnown RBP eCLIP6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 MYO1EQ12965 1108 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 FBXO43Q4G163 708 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 PLA2G2CQ5R387 149 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 C4orf50Q6ZRC1 276 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 PRR23BQ6ZRT6 265 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 DENND5BQ6ZUT9 1274 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 UNC13DQ70J99 1090 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 SPATA2LQ8IUW3 424 aaPredicted RBP6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 SCN4BQ8IWT1 228 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 CAMKK1Q8N5S9 505 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 KIAA1958Q8N8K9 716 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 IQUBQ8NA54 791 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 NETO1Q8TDF5 533 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 SH3RF2Q8TEC5 729 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 DHX58Q96C10 678 aa6.6□□□□□ -1.35
PNKDP1-201ENST00000435914 LOXL4Q96JB6 756 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms