RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SLC12A4Q9UP95 1085 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 SLC45A1Q9Y2W3 748 aa19.53■□□□□ 0.72
CLK1-205ENST00000434813 FARP1Q9Y4F1 1045 aaPredicted RBP19.53■□□□□ 0.72
CLK1-205ENST00000434813 RASA4BC9J798 803 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 ALOX15BO15296 676 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 RASA4O43374 803 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 CELF2O95319 508 aaKnown RBP19.52■□□□□ 0.72
CLK1-205ENST00000434813 GH1P01241 217 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 KDELR1P24390 212 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 ARHGAP1Q07960 439 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 TRPM8Q7Z2W7 1104 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 PCGF5Q86SE9 256 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 ZNF784Q8NCA9 323 aaPredicted RBP19.52■□□□□ 0.72
CLK1-205ENST00000434813 GPRC5AQ8NFJ5 357 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 TMEM176AQ96HP8 235 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 SGSM3Q96HU1 749 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 MS4A4AQ96JQ5 239 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.52■□□□□ 0.72
CLK1-205ENST00000434813 EVPLQ92817 2033 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 CST8O60676 142 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 MICAL2O94851 1124 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 IFNB1P01574 187 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 P4HA1P13674 534 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 INSRRP14616 1297 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 STX2P32856 288 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 ORC1Q13415 861 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 XRCC4Q13426 336 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 ACAP1Q15027 740 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 KYAT1Q16773 422 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 KCNT1Q5JUK3 1230 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 TRABD2AQ86V40 505 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 EMC1Q8N766 993 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 MCRS1Q96EZ8 462 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 MAGEB18Q96M61 343 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 MLXIPLQ9NP71 852 aa19.52■□□□□ 0.72
CLK1-205ENST00000434813 USP15Q9Y4E8 981 aaPredicted RBP19.52■□□□□ 0.72
CLK1-205ENST00000434813 BTBD19C9JJ37 291 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 MAGEB2O15479 319 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 HMGCRP04035 888 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 LGALS2P05162 132 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 DYNLT1P63172 113 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 IGBP1P78318 339 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 MYO1EQ12965 1108 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 RASA2Q15283 850 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 NUGGCQ68CJ6 796 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 ARMCX2Q7L311 632 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 A0A087WZ62 844 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 FAM47DPA6NHR8 397 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 M0QYV0 167 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 ATP2C2O75185 946 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 LAMC2Q13753 1193 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 HIF1AQ16665 826 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 ICE2Q659A1 982 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 PPIL6Q8IXY8 311 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 ZBED8Q8IZ13 594 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 TMEM130Q8N3G9 435 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 GDAP1Q8TB36 358 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 TGS1Q96RS0 853 aaKnown RBP19.51■□□□□ 0.71
CLK1-205ENST00000434813 FDXACB1Q9BRP7 624 aaPredicted RBP19.51■□□□□ 0.71
CLK1-205ENST00000434813 FAM124BQ9H5Z6 455 aaPredicted RBP19.51■□□□□ 0.71
CLK1-205ENST00000434813 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.51■□□□□ 0.71
CLK1-205ENST00000434813 SENP1Q9P0U3 644 aa19.51■□□□□ 0.71
CLK1-205ENST00000434813 COL1A2P08123 1366 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 SUN1O94901 812 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 VDRP11473 427 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 GPD2P43304 727 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 CTCFP49711 727 aaPredicted RBP19.5■□□□□ 0.71
CLK1-205ENST00000434813 GDF10P55107 478 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 INCA1Q0VD86 236 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 CMASQ8NFW8 434 aaPredicted RBP19.5■□□□□ 0.71
CLK1-205ENST00000434813 VPS37BQ9H9H4 285 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 KLC4Q9NSK0 619 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 SAE1Q9UBE0 346 aaPredicted RBP19.5■□□□□ 0.71
CLK1-205ENST00000434813 PLXNA1Q9UIW2 1896 aa19.5■□□□□ 0.71
CLK1-205ENST00000434813 APOC4-APOC2K7ER74 178 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 STAU1O95793 577 aaKnown RBP19.49■□□□□ 0.71
CLK1-205ENST00000434813 APOC2P02655 101 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 MIPP30301 263 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 PSMC4P43686 418 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 SLC18A1P54219 525 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 PDIA2Q13087 525 aaKnown RBP19.49■□□□□ 0.71
CLK1-205ENST00000434813 SLC10A6Q3KNW5 377 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 ANKRD23Q86SG2 305 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 FUKQ8N0W3 1084 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 BRI3BPQ8WY22 251 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 HPDLQ96IR7 371 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 PLCD4Q9BRC7 762 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 HAUS2Q9NVX0 235 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 SLC24A2Q9UI40 661 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 PRPF4O43172 522 aaKnown RBP eCLIP19.49■□□□□ 0.71
CLK1-205ENST00000434813 CSDE1O75534 798 aaKnown RBP19.49■□□□□ 0.71
CLK1-205ENST00000434813 RNF8O76064 485 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 CD48P09326 243 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 ARF4P18085 180 aaPredicted RBP19.49■□□□□ 0.71
CLK1-205ENST00000434813 RDXP35241 583 aaKnown RBP19.49■□□□□ 0.71
CLK1-205ENST00000434813 PCK1P35558 622 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 GCLCP48506 637 aaPredicted RBP19.49■□□□□ 0.71
CLK1-205ENST00000434813 SF3A3Q12874 501 aaKnown RBP eCLIP19.49■□□□□ 0.717e-7■■■□□ 14.6
CLK1-205ENST00000434813 TMEM132DQ14C87 1099 aa19.49■□□□□ 0.71
CLK1-205ENST00000434813 SPATA21Q7Z572 469 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms