RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 RASSF9O75901 435 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 MCF2P10911 925 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 ALKBH2Q6NS38 261 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 C11orf57Q6ZUT1 292 aaPredicted RBP12.67□□□□□ -0.38
UBE3B-203ENST00000434735 CYP2W1Q8TAV3 490 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 TRAIPQ9BWF2 469 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 UPF3AQ9H1J1 476 aaKnown RBP12.67□□□□□ -0.38
UBE3B-203ENST00000434735 GIMAP4Q9NUV9 329 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 TRIM10Q9UDY6 481 aa12.67□□□□□ -0.38
UBE3B-203ENST00000434735 RHOBTB3O94955 611 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 HSPA4LO95757 839 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 SLCO1A2P46721 670 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 FMO5P49326 533 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 ZNF438Q7Z4V0 828 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 LGI2Q8N0V4 545 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 BRI3BPQ8WY22 251 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 MRFAP1L1Q96HT8 127 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 A8MX80 341 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 DNTTP04053 509 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 DDX5P17844 614 aaKnown RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 EEF1B2P24534 225 aaKnown RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 SMTNL2Q2TAL5 461 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 GPR158Q5T848 1215 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 TRMT11Q7Z4G4 463 aaKnown RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 MAB21L3Q8N8X9 362 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 GTPBP2Q9BX10 602 aaKnown RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 ATP13A1Q9HD20 1204 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 PSMD12O00232 456 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 SETSIPP0DME0 302 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 DARSP14868 501 aaKnown RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 BCAT1P54687 386 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 SEC13P55735 322 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 GFPT1Q06210 699 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 MTHFD1LQ6UB35 978 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 CPA6Q8N4T0 437 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 PPP1R16AQ96I34 528 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 AGPAT1Q99943 283 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 TRIM15Q9C019 465 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 TRIM9Q9C026 710 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 TMEM63CQ9P1W3 806 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 PACSIN2Q9UNF0 486 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 NCF2P19878 526 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 DHPSP49366 369 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 RGS4P49798 205 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 RAP1GDS1P52306 607 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 DUSP28Q4G0W2 176 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 LCA5Q86VQ0 697 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 C17orf53Q8N3J3 647 aaPredicted RBP12.66□□□□□ -0.38
UBE3B-203ENST00000434735 MAP3K14Q99558 947 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 CAPS2Q9BXY5 557 aa12.66□□□□□ -0.38
UBE3B-203ENST00000434735 IQANK1A0A1B0GTG1 560 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 APODP05090 189 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 CAPZA2P47755 286 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 CAMK2GQ13555 558 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 CBWD2Q8IUF1 395 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 C4orf19Q8IY42 314 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 KIAA0319LQ8IZA0 1049 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 ZDHHC6Q9H6R6 413 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 MED24O75448 989 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 DR1Q01658 176 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 ARID5BQ14865 1188 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 MARK2Q7KZI7 788 aaKnown RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 TRIM59Q8IWR1 403 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 C1orf131Q8NDD1 294 aaKnown RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 SENP8Q96LD8 212 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 SERPINI1Q99574 410 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 BBS2Q9BXC9 721 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 DCLK3Q9C098 648 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 SCHIP1Q9P0W5 487 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 APEX2Q9UBZ4 518 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 TRIM66O15016 1216 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 LGR5O75473 907 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 HMOX2P30519 316 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 TRMT10CQ7L0Y3 403 aaKnown RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 TBC1D1Q86TI0 1168 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 PPM1NQ8N819 430 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 SMARCD1Q96GM5 515 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 DMAP1Q9NPF5 467 aaPredicted RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 HCN4Q9Y3Q4 1203 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 SLC16A3O15427 465 aaKnown RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 MTA2O94776 668 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 HALP42357 657 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 KDSRQ06136 332 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 GPS1Q13098 491 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 ZC3H12BQ5HYM0 836 aaKnown RBP12.65□□□□□ -0.38
UBE3B-203ENST00000434735 RRM2BQ7LG56 351 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 DDIASQ8IXT1 998 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 CXorf40AQ8TE69 158 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 CEP19Q96LK0 163 aa12.65□□□□□ -0.38
UBE3B-203ENST00000434735 TBC1D3DA0A087WVF3 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3IA0A087WXS9 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3EA0A087X179 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3KA0A087X1G2 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3FA6NER0 549 aaPredicted RBP12.65□□□□□ -0.39
UBE3B-203ENST00000434735 C2orf81A6NN90 581 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3LB9A6J9 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D12O60347 775 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3HP0C7X1 549 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 PDCLQ13371 301 aa12.65□□□□□ -0.39
UBE3B-203ENST00000434735 TBC1D3GQ6DHY5 549 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms