RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 EFHC2Q5JST6 749 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 JADE1Q6IE81 842 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 RGS9BPQ6ZS82 235 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 FBXO16Q8IX29 292 aaPredicted RBP10.94□□□□□ -0.66
CD44-210ENST00000434472 ZBED8Q8IZ13 594 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 GLIS1Q8NBF1 620 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 GDAP1Q8TB36 358 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ACTL9Q8TC94 416 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 HAUS1Q96CS2 278 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ADPGKQ9BRR6 497 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 TMEM121Q9BTD3 319 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ELOVL4Q9GZR5 314 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 PRKAG3Q9UGI9 489 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 CYTH4Q9UIA0 394 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 ITGA11Q9UKX5 1188 aa10.94□□□□□ -0.66
CD44-210ENST00000434472 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.94□□□□□ -0.66
CD44-210ENST00000434472 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 A0A1B0GUA9 196 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 E7ESA3 106 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 M0QYV0 167 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 MGRN1O60291 552 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 GH1P01241 217 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 ERBB2P04626 1255 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 ITGB3P05106 788 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 NFICP08651 508 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 GPD1P21695 349 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 GCAP28676 217 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 STIP1P31948 543 aaKnown RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 CTCFP49711 727 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 GEMIN4P57678 1058 aaKnown RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 SNX16P57768 344 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 RBP5P82980 135 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 GALNTL6Q49A17 601 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 APBB1IPQ7Z5R6 666 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 ARFGAP1Q8N6T3 406 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 CEP120Q8N960 986 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 NAT8LQ8N9F0 302 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 DENND1AQ8TEH3 1009 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 PYROXD1Q8WU10 500 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 TRAPPC12Q8WVT3 735 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 ACSF2Q96CM8 615 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 CPXM1Q96SM3 734 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 CNPY3Q9BT09 278 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 MAK16Q9BXY0 300 aaKnown RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 FRMD8Q9BZ67 464 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 PITPNM3Q9BZ71 974 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 SDCBP2Q9H190 292 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 SMYD3Q9H7B4 428 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 RXFP1Q9HBX9 757 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 ZMYND8Q9ULU4 1186 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 BARX2Q9UMQ3 279 aaPredicted RBP10.93□□□□□ -0.66
CD44-210ENST00000434472 STARD13Q9Y3M8 1113 aa10.93□□□□□ -0.66
CD44-210ENST00000434472 DICER1Q9UPY3 1922 aaKnown RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 ADM5C9JUS6 153 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 ASMTLO95671 621 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 SETSIPP0DME0 302 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 INSRRP14616 1297 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 TAC1P20366 129 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 IL1R2P27930 398 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 MIPP30301 263 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 SLC8A1P32418 973 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 RPL22P35268 128 aaKnown RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 GPD2P43304 727 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 ZNF143P52747 638 aaPredicted RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 CDH8P55286 799 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 EIF3EP60228 445 aaKnown RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 DYNLT1P63172 113 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 ELF3P78545 371 aaPredicted RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 INCA1Q0VD86 236 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 CBLBQ13191 982 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 RIPK1Q13546 671 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 TMEM132DQ14C87 1099 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 AMHR2Q16671 573 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 HHATQ5VTY9 493 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 MAP7D3Q8IWC1 876 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 PDIK1LQ8N165 341 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 LINC01465Q8N7H1 131 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 AFG1LQ8WV93 481 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 CPT1BQ92523 772 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 COPS5Q92905 334 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 ALKBH8Q96BT7 664 aaKnown RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 HPDLQ96IR7 371 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 HEXIM2Q96MH2 286 aaKnown RBP10.92□□□□□ -0.66
CD44-210ENST00000434472 PDZD7Q9H5P4 517 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 MINDY3Q9H8M7 445 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 VTA1Q9NP79 307 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 ABCF3Q9NUQ8 709 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 USP18Q9UMW8 372 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 C2CD2Q9Y426 696 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 OTOFQ9HC10 1997 aa10.92□□□□□ -0.66
CD44-210ENST00000434472 A0A087WZ62 844 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 CFAP69A5D8W1 941 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 DPYSL4O14531 572 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 SPAG6O75602 509 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ATP5HO75947 161 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ENDOD1O94919 500 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 UBOX5O94941 541 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 ZWINTO95229 277 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 LGALS2P05162 132 aa10.91□□□□□ -0.66
CD44-210ENST00000434472 SKIV2L2P42285 1042 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms