RNA–Protein interactions for RNA: ENST00000434278.5

LMBR1-208, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 678 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-208ENST00000434278 C1orf210Q8IVY1 113 aa21.55■■□□□ 1.04
LMBR1-208ENST00000434278 CELF5Q8N6W0 485 aaKnown RBP21.55■■□□□ 1.04
LMBR1-208ENST00000434278 BPIFB1Q8TDL5 484 aa21.55■■□□□ 1.04
LMBR1-208ENST00000434278 MRPS31Q92665 395 aaKnown RBP21.55■■□□□ 1.04
LMBR1-208ENST00000434278 USP13Q92995 863 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-208ENST00000434278 CLDN23Q96B33 292 aa21.55■■□□□ 1.04
LMBR1-208ENST00000434278 SPATA17Q96L03 361 aa21.55■■□□□ 1.04
LMBR1-208ENST00000434278 UXTQ9UBK9 157 aaPredicted RBP21.55■■□□□ 1.04
LMBR1-208ENST00000434278 CCL26Q9Y258 94 aa21.55■■□□□ 1.04
LMBR1-208ENST00000434278 DMDP11532 3685 aa21.55■■□□□ 1.04
LMBR1-208ENST00000434278 SOBPA7XYQ1 873 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 PROB1E7EW31 1015 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 MAN2B1O00754 1011 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 TRIM49P0CI25 452 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 TRIM49CP0CI26 452 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 RPL13P26373 211 aaKnown RBP21.54■■□□□ 1.04
LMBR1-208ENST00000434278 AVPR1AP37288 418 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 CACNA2D1P54289 1103 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 USP46P62068 366 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 PPP3CAQ08209 521 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 SGSM1Q2NKQ1 1148 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 ARHGAP29Q52LW3 1261 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 INTS8Q75QN2 995 aaKnown RBP21.54■■□□□ 1.04
LMBR1-208ENST00000434278 FRMD5Q7Z6J6 570 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 FAM186BQ8IYM0 893 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 MAML2Q8IZL2 1156 aaPredicted RBP21.54■■□□□ 1.04
LMBR1-208ENST00000434278 B3GALNT2Q8NCR0 500 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 TTC8Q8TAM2 541 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 CSGALNACT1Q8TDX6 532 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 FAM3CQ92520 227 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 B3GNT5Q9BYG0 378 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 ZNF518BQ9C0D4 1074 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 TMEM30AQ9NV96 361 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 RMND1Q9NWS8 449 aa21.54■■□□□ 1.04
LMBR1-208ENST00000434278 NDRG2Q9UN36 371 aaKnown RBP21.54■■□□□ 1.04
LMBR1-208ENST00000434278 MRPS17Q9Y2R5 130 aaKnown RBP21.54■■□□□ 1.04
LMBR1-208ENST00000434278 CLDN5O00501 218 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 ASS1P00966 412 aaKnown RBP21.53■■□□□ 1.04
LMBR1-208ENST00000434278 HLA-DRAP01903 254 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 PSMC2P35998 433 aaKnown RBP21.53■■□□□ 1.04
LMBR1-208ENST00000434278 PRCPP42785 496 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 SOX9P48436 509 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 GCLMP48507 274 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 SPOPLQ6IQ16 392 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 SPATA20Q8TB22 786 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 RIN3Q8TB24 985 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 TIGD1Q96MW7 591 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 GSDMAQ96QA5 445 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 GTSE1Q9NYZ3 720 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 PCDHA5Q9Y5H7 936 aa21.53■■□□□ 1.04
LMBR1-208ENST00000434278 KIF26AQ9ULI4 1882 aaPredicted RBP21.52■■□□□ 1.04
LMBR1-208ENST00000434278 F8VP50 259 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 TRIM66O15016 1216 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 CCNE1P24864 410 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 ANXA13P27216 316 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 MLLT6P55198 1093 aaPredicted RBP21.52■■□□□ 1.04
LMBR1-208ENST00000434278 TNK2Q07912 1038 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 EDRF1Q3B7T1 1238 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 ZNF658Q5TYW1 1059 aaPredicted RBP21.52■■□□□ 1.04
LMBR1-208ENST00000434278 DENND5BQ6ZUT9 1274 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 TAF4BQ92750 862 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 EEF2KMTQ96G04 330 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 C8orf48Q96LL4 319 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 CEP295NLQ96MC4 621 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 SLC22A12Q96S37 553 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 CYP2S1Q96SQ9 504 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 TRPC7Q9HCX4 862 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.52■■□□□ 1.041e-6■■■■■ 63
LMBR1-208ENST00000434278 TDP1Q9NUW8 608 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 SPATA6Q9NWH7 488 aaPredicted RBP21.52■■□□□ 1.04
LMBR1-208ENST00000434278 PATJQ8NI35 1801 aa21.52■■□□□ 1.04
LMBR1-208ENST00000434278 F5P12259 2224 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 ZNF638Q14966 1978 aaKnown RBP21.51■■□□□ 1.03
LMBR1-208ENST00000434278 NCAM2O15394 837 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 KRT13P13646 458 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 PIK3CAP42336 1068 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 MAGEA9P43362 315 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 ASPAP45381 313 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 RPS9P46781 194 aaKnown RBP21.51■■□□□ 1.03
LMBR1-208ENST00000434278 KPNA1P52294 538 aaPredicted RBP21.51■■□□□ 1.03
LMBR1-208ENST00000434278 MCCD1P59942 119 aaPredicted RBP21.51■■□□□ 1.03
LMBR1-208ENST00000434278 ENPEPQ07075 957 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 TAS1R2Q8TE23 839 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 ELOVL4Q9GZR5 314 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 MMRN2Q9H8L6 949 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 THG1LQ9NWX6 298 aaKnown RBP21.51■■□□□ 1.03
LMBR1-208ENST00000434278 ANAPC1Q9H1A4 1944 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 CACNA1IQ9P0X4 2223 aa21.51■■□□□ 1.03
LMBR1-208ENST00000434278 USP34Q70CQ2 3546 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 C2orf78A6NCI8 922 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 GFRA3O60609 400 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 SMC2O95347 1197 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 SP9P0CG40 484 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 P4HA1P13674 534 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 PLCB2Q00722 1185 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 ORC1Q13415 861 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 ZNF268Q14587 947 aaPredicted RBP21.5■■□□□ 1.03
LMBR1-208ENST00000434278 COBLL1Q53SF7 1204 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 TXNDC11Q6PKC3 985 aa21.5■■□□□ 1.03
LMBR1-208ENST00000434278 PAQR9Q6ZVX9 377 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms