RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 ZNF687Q8N1G0 1237 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 TTC8Q8TAM2 541 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 FNBP1Q96RU3 617 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 MMS19Q96T76 1030 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 MAGED2Q9UNF1 606 aaPredicted RBP18.11■□□□□ 0.49
UBE3D-204ENST00000430071 FRMD4BQ9Y2L6 1034 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 ZNF292O60281 2723 aa18.11■□□□□ 0.49
UBE3D-204ENST00000430071 SDK1Q7Z5N4 2213 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 SYCE3A1L190 88 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 LRRIQ3A6PVS8 624 aaPredicted RBP18.1■□□□□ 0.49
UBE3D-204ENST00000430071 MAPK13O15264 365 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 GFRA3O60609 400 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 PSMC2P35998 433 aaKnown RBP18.1■□□□□ 0.49
UBE3D-204ENST00000430071 SMARCB1Q12824 385 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 VEPH1Q14D04 833 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 WDR44Q5JSH3 913 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 FAM186BQ8IYM0 893 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 RIN3Q8TB24 985 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 PARD3BQ8TEW8 1205 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 DNASE1L2Q92874 299 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 SYT15Q9BQS2 421 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 GPR88Q9GZN0 384 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 XYLT2Q9H1B5 865 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 IRF2BPLQ9H1B7 796 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 ANO10Q9NW15 660 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 DACH1Q9UI36 760 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 NDRG2Q9UN36 371 aaKnown RBP18.1■□□□□ 0.49
UBE3D-204ENST00000430071 R4GN57 208 aa18.1■□□□□ 0.49
UBE3D-204ENST00000430071 SLC38A8A6NNN8 435 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 ZNF263O14978 683 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 LETM1O95202 739 aaPredicted RBP18.09■□□□□ 0.49
UBE3D-204ENST00000430071 VNN1O95497 513 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 WARSP23381 471 aaKnown RBP18.09■□□□□ 0.49
UBE3D-204ENST00000430071 ERCC5P28715 1186 aaPredicted RBP18.09■□□□□ 0.49
UBE3D-204ENST00000430071 LHX1P48742 406 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 TAF12Q16514 161 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 NFE2Q16621 373 aaPredicted RBP18.09■□□□□ 0.49
UBE3D-204ENST00000430071 ZSCAN23Q3MJ62 389 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 C1orf220Q5T0J3 134 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 TDRD10Q5VZ19 366 aaKnown RBP18.09■□□□□ 0.49
UBE3D-204ENST00000430071 TXNDC8Q6A555 127 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 DPH6Q7L8W6 267 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 C1orf210Q8IVY1 113 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 SCN4BQ8IWT1 228 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 MAB21L3Q8N8X9 362 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 DEPDC1BQ8WUY9 529 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 IRF7Q92985 503 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 MYLPFQ96A32 169 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 FUCA2Q9BTY2 467 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 DPEP3Q9H4B8 488 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 TASP1Q9H6P5 420 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 CCL26Q9Y258 94 aa18.09■□□□□ 0.49
UBE3D-204ENST00000430071 MYO18AQ92614 2054 aaKnown RBP18.08■□□□□ 0.49
UBE3D-204ENST00000430071 SLC16A3O15427 465 aaKnown RBP18.08■□□□□ 0.49
UBE3D-204ENST00000430071 SP9P0CG40 484 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 PCSK1P29120 753 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 FCHO2Q0JRZ9 810 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 WDR72Q3MJ13 1102 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 TMC2Q8TDI7 906 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 CEP63Q96MT8 703 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 SRRTQ9BXP5 876 aaKnown RBP18.08■□□□□ 0.49
UBE3D-204ENST00000430071 TMEM30AQ9NV96 361 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 R3HCC1Q9Y3T6 440 aaKnown RBP18.08■□□□□ 0.49
UBE3D-204ENST00000430071 PIAS3Q9Y6X2 628 aa18.08■□□□□ 0.49
UBE3D-204ENST00000430071 RALGAPA1Q6GYQ0 2036 aa18.08■□□□□ 0.48
UBE3D-204ENST00000430071 PRR23AA6NEV1 266 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 C4BPAP04003 597 aaKnown RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 EPB41P11171 864 aaKnown RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 BDNFP23560 247 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CDC25CP30307 473 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 RAP1GAPP47736 663 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CACNA2D1P54289 1103 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CDH8P55286 799 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CLDN10P78369 228 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 TNK2Q07912 1038 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 ARHGAP15Q53QZ3 475 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CT47A1Q5JQC4 288 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 TXNDC11Q6PKC3 985 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 ZNF852Q6ZMS4 543 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 INTS8Q75QN2 995 aaKnown RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 FILIP1Q7Z7B0 1213 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 SPATA2LQ8IUW3 424 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 SPATA18Q8TC71 538 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 USP13Q92995 863 aaPredicted RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CLDN23Q96B33 292 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 SLC22A12Q96S37 553 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 SDCBP2Q9H190 292 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 SMYD3Q9H7B4 428 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 GTSE1Q9NYZ3 720 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 NXF1Q9UBU9 619 aaKnown RBP18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CDH9Q9ULB4 789 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 EML5Q05BV3 1969 aa18.07■□□□□ 0.48
UBE3D-204ENST00000430071 CHADO15335 359 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 NOL4O94818 638 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 FGF19O95750 216 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 TRIM49P0CI25 452 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 TRIM49CP0CI26 452 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 CSH1P0DML2 217 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 CSH2P0DML3 217 aa18.06■□□□□ 0.48
UBE3D-204ENST00000430071 GNL1P36915 607 aaPredicted RBP18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms