RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 RNF225M0QZC1 329 aaPredicted RBP15.45■□□□□ 0.06
SGCE-204ENST00000428696 TEX33O43247 280 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 SLC34A2O95436 690 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 RHOP08100 348 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 FAM200BP0CF97 657 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 BMP1P13497 986 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 GJA1P17302 382 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 ATF6P18850 670 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 ZNF445P59923 1031 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 FANCCQ00597 558 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 MTMR3Q13615 1198 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 SMAD2Q15796 467 aaKnown RBP15.45■□□□□ 0.06
SGCE-204ENST00000428696 CFAP221Q4G0U5 840 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 KLHDC7AQ5VTJ3 777 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 VSTM1Q6UX27 236 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 FAM35AQ86V20 835 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 FUKQ8N0W3 1084 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 NEK11Q8NG66 645 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 KCNK16Q96T55 309 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 HSFX1Q9UBD0 423 aa15.45■□□□□ 0.06
SGCE-204ENST00000428696 SLC38A8A6NNN8 435 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 ABL1P00519 1130 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 PNMA6AP0CW24 399 aaPredicted RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 ACO1P21399 889 aaKnown RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 CACNA2D1P54289 1103 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 UBASH3AP57075 661 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 POLR2FP61218 127 aaKnown RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 SGO2Q562F6 1265 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 TJAP1Q5JTD0 557 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 PPP1R26Q5T8A7 1209 aaPredicted RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 GPIHBP1Q8IV16 184 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 ST13P5Q8NFI4 369 aaPredicted RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 ITFG1Q8TB96 612 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 SUSD6Q92537 303 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 SMARCD1Q96GM5 515 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 NAP1L5Q96NT1 182 aaPredicted RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 WDR6Q9NNW5 1121 aaKnown RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 SIX2Q9NPC8 291 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 NLRC4Q9NPP4 1024 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 RTN4Q9NQC3 1192 aaKnown RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 ASB3Q9Y575 518 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 CLUHO75153 1309 aa15.44■□□□□ 0.06
SGCE-204ENST00000428696 SPTBN5Q9NRC6 3674 aaKnown RBP15.44■□□□□ 0.06
SGCE-204ENST00000428696 ZNF197O14709 1029 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 TRIM66O15016 1216 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 BRD2P25440 801 aaKnown RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 MAGEA11P43364 429 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 SLC8A3P57103 927 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 DRAP1Q14919 205 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 GOLGA7BQ2TAP0 167 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 PAQR9Q6ZVX9 377 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 APTXQ7Z2E3 356 aaKnown RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 UBA3Q8TBC4 463 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 PSMG2Q969U7 264 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 ACSF2Q96CM8 615 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 TCEAL4Q96EI5 215 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 NECAB3Q96P71 396 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 GCNAQ96QF7 691 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 HNRNPABQ99729 332 aaKnown RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 PHF7Q9BWX1 381 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 ATXN3LQ9H3M9 355 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 SLITRK6Q9H5Y7 841 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 DMAP1Q9NPF5 467 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 IFNKQ9P0W0 207 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 HESX1Q9UBX0 185 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 AJAP1Q9UKB5 411 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 KIAA1257Q9ULG3 409 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 FHOD1Q9Y613 1164 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 TSC2P49815 1807 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 UNC80Q8N2C7 3258 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 A0A1W2PRU2 124 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 FOXN3O00409 490 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 CYP26A1O43174 497 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 THAP12O43422 761 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 CSH1P0DML2 217 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 CSH2P0DML3 217 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 VDRP11473 427 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 UCHL3P15374 230 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 GABRR2P28476 465 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 CACNA2D4Q7Z3S7 1137 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 MCRS1Q96EZ8 462 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 SPAG5Q96R06 1193 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 FAM124BQ9H5Z6 455 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 ZNF334Q9HCZ1 680 aaPredicted RBP15.43■□□□□ 0.06
SGCE-204ENST00000428696 ACP6Q9NPH0 428 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 NR2E1Q9Y466 385 aa15.43■□□□□ 0.06
SGCE-204ENST00000428696 C5orf42Q9H799 3197 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 BEST1O76090 585 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 PAEPP09466 180 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 GNA15P30679 374 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 SLC5A9Q2M3M2 681 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 OTOP3Q7RTS5 596 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 UBR7Q8N806 425 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 TDRD5Q8NAT2 981 aaKnown RBP15.42■□□□□ 0.06
SGCE-204ENST00000428696 TTC16Q8NEE8 873 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 ADAMTS19Q8TE59 1207 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 TFAP2BQ92481 460 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 C8orf48Q96LL4 319 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 SMOQ99835 787 aa15.42■□□□□ 0.06
SGCE-204ENST00000428696 ANP32EQ9BTT0 268 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms