RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 BMP15O95972 392 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 DDIT3P35638 169 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 FOXC1Q12948 553 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 C2orf27AQ580R0 203 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 SH3PXD2AQ5TCZ1 1133 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 ANO7Q6IWH7 933 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 CYP2U1Q7Z449 544 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 C11orf74Q86VG3 221 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 OSTM1Q86WC4 334 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 BRSK2Q8IWQ3 736 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 ADGRF2Q8IZF7 708 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 CSGALNACT2Q8N6G5 542 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 LRRC52Q8N7C0 313 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 ZSWIM2Q8NEG5 633 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 FAM84AQ96KN4 292 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 PKMYT1Q99640 499 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 LINC00597Q9H2U6 94 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 MRPL44Q9H9J2 332 aaKnown RBP19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 RBAKQ9NYW8 714 aaPredicted RBP19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 EXOC7Q9UPT5 735 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 SNX9Q9Y5X1 595 aa19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 HELZP42694 1942 aaKnown RBP19.64■□□□□ 0.73
UPK3BP1-201ENST00000428678 PKD1L2Q7Z442 2459 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 ASCC3Q8N3C0 2202 aaKnown RBP19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 C1QTNF9BB2RNN3 333 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 KHNYNO15037 678 aaKnown RBP19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 HCRTO43612 131 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 PPP1R37O75864 691 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 NFATC1O95644 943 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 KRT19P08727 400 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 C1QTNF9P0C862 333 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 HDCP19113 662 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 PCSK1P29120 753 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 KCNA1Q09470 495 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 CFAP221Q4G0U5 840 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 PMS2CLQ68D20 193 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 UNQ6494/PRO21346Q6UXR6 183 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 TTC30AQ86WT1 665 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 USP33Q8TEY7 942 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 NOC3LQ8WTT2 800 aaKnown RBP19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 ACCSQ96QU6 501 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 TMEM9BQ9NQ34 198 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 TBC1D7Q9P0N9 293 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 GCNT4Q9P109 453 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 ITGA11Q9UKX5 1188 aa19.63■□□□□ 0.73
UPK3BP1-201ENST00000428678 CACNA1EQ15878 2313 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 LHX1P48742 406 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 SCARA3Q6AZY7 606 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 FUBP3Q96I24 572 aaKnown RBP eCLIP19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 TMX3Q96JJ7 454 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 GDAP2Q9NXN4 497 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 SEL1LQ9UBV2 794 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 ARHGAP26Q9UNA1 814 aa19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 DSPP15924 2871 aaKnown RBP19.62■□□□□ 0.73
UPK3BP1-201ENST00000428678 GOLGA8IPA6NC78 632 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 GOLGA8JA6NMD2 632 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 GCNT3O95395 438 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 SPINK2P20155 84 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 BCKDHBP21953 392 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 DHPSP49366 369 aaPredicted RBP19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 RBP5P82980 135 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 RABEP1Q15276 862 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 SF3A1Q15459 793 aaKnown RBP19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 L1TD1Q5T7N2 865 aaKnown RBP19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 C4orf50Q6ZRC1 276 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 CCDC33Q8N5R6 958 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 TOP6BLQ8N6T0 577 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 SPATA18Q8TC71 538 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 EPSTI1Q96J88 318 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 STRA6Q9BX79 667 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 MTMR12Q9C0I1 747 aa19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 CIZ1Q9ULV3 898 aaPredicted RBP19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 ANKRD11Q6UB99 2663 aaPredicted RBP19.61■□□□□ 0.73
UPK3BP1-201ENST00000428678 PATE3B3GLJ2 98 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 K7EQS6 105 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 ATP2C2O75185 946 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 LDHAP00338 332 aaKnown RBP19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 TMEM191BP0C7N4 346 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 TCF3P15923 654 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 GAP43P17677 238 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 OPRD1P41143 372 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 MAGEA11P43364 429 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 PDE6CP51160 858 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 PSMC1P62191 440 aaKnown RBP19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 SOWAHAQ2M3V2 549 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 UAP1L1Q3KQV9 507 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 USP49Q70CQ1 688 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 RASSF3Q86WH2 238 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 SYCP3Q8IZU3 236 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 MDGA1Q8NFP4 955 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 CXorf38Q8TB03 319 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 CNOT6LQ96LI5 555 aaKnown RBP19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 SYT15Q9BQS2 421 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 PDE11AQ9HCR9 933 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 MAGEC2Q9UBF1 373 aaPredicted RBP19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 SIX4Q9UIU6 781 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 ZMIZ1Q9ULJ6 1067 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 MMP17Q9ULZ9 603 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 SMC3Q9UQE7 1217 aa19.6■□□□□ 0.73
UPK3BP1-201ENST00000428678 R3HCC1Q9Y3T6 440 aaKnown RBP19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms