RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 MGAT5BQ3V5L5 792 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 CCDC122Q5T0U0 273 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 ALKBH5Q6P6C2 394 aaKnown RBP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 RNF19BQ6ZMZ0 732 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 MMS22LQ6ZRQ5 1243 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 KIAA1328Q86T90 577 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 TTC30AQ86WT1 665 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 SCN4BQ8IWT1 228 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 TTC9BQ8N6N2 239 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 MRPL43Q8N983 215 aaKnown RBP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 ANKRD52Q8NB46 1076 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 ATAD1Q8NBU5 361 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 ACRBPQ8NEB7 543 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 SLC30A5Q8TAD4 765 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 OLIG1Q8TAK6 271 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 IPO4Q8TEX9 1081 aaKnown RBP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 C2orf15Q8WU43 125 aaKnown RBP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 CPA5Q8WXQ8 436 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 FUBP3Q96I24 572 aaKnown RBP eCLIP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 CLSTN3Q9BQT9 956 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 LMAN2LQ9H0V9 348 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 LHX5Q9H2C1 402 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 RXFP1Q9HBX9 757 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 ABCB6Q9NP58 842 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 NGRNQ9NPE2 291 aaKnown RBP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 ST7Q9NRC1 585 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 TAS2R14Q9NYV8 317 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 FNIP2Q9P278 1114 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 NAGPAQ9UK23 515 aa8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 EPN1Q9Y6I3 576 aaPredicted RBP8.37□□□□□ -1.07
HMGA1P4-201ENST00000428643 TRIP11Q15643 1979 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 WDR27A2RRH5 827 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 C2orf71A6NGG8 1288 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 EPOPA6NHQ4 379 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 EIF3CLB5ME19 914 aaKnown RBP8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 F8VP50 259 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 FSCN2O14926 492 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 TRIM66O15016 1216 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 LILRB3O75022 631 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 GLUD1P00367 558 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CYP1A1P04798 512 aaPredicted RBP8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CCDC175P0C221 793 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 ABCB4P21439 1286 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CYP2F1P24903 491 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 KLRC2P26717 231 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 ELF1P32519 619 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 IRS1P35568 1242 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 GRIK1P39086 918 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 MAGEA11P43364 429 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CACNA2D1P54289 1103 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 MAP3K7CLP57077 242 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 KRT83P78385 493 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CENPCQ03188 943 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PDE4CQ08493 712 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 RAB33AQ14088 237 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PTPROQ16827 1216 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 ASTE1Q2TB18 679 aaPredicted RBP8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 LRIT3Q3SXY7 679 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CFAP221Q4G0U5 840 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 LIN9Q5TKA1 542 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 TPGS2Q68CL5 300 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PDE12Q6L8Q7 609 aaKnown RBP8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PPP1R2P3Q6NXS1 205 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 CLEC20AQ6ZU45 233 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PAQR9Q6ZVX9 377 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 SIX6OS1Q8N1H7 587 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 SPPL2BQ8TCT7 592 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZNF653Q96CK0 615 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 TRIM11Q96F44 468 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PPP1R13BQ96KQ4 1090 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 KLHL5Q96PQ7 755 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 EIF3CQ99613 913 aaKnown RBP8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 C11orf70Q9BRQ4 267 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 DUSP16Q9BY84 665 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 AFF4Q9UHB7 1163 aaKnown RBP8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 PYCARDQ9ULZ3 195 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 IRAK3Q9Y616 596 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 KIAA1671Q9BY89 1806 aa8.36□□□□□ -1.07
HMGA1P4-201ENST00000428643 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 E5RJQ4 531 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 RFXAPO00287 272 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 TULP2O00295 520 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 PIK3R2O00459 728 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ZNF263O14978 683 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 XPO1O14980 1071 aaKnown RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 ATMINO43313 823 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 RTN2O75298 545 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 SOAT2O75908 522 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 LCA5LO95447 670 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 VNN2O95498 520 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 FTLP02792 175 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CALB1P05937 261 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 H2AFZP0C0S5 128 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 HAPLN1P10915 354 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 GZMAP12544 262 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 UNGP13051 313 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 MMP8P22894 467 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 CDH5P33151 784 aaPredicted RBP8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 GPD2P43304 727 aa8.35□□□□□ -1.07
HMGA1P4-201ENST00000428643 MAGEA1P43355 309 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms