RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 CYP39A1Q9NYL5 469 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 LIMA1Q9UHB6 759 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 FBXL21Q9UKT6 434 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 TEX28O15482 410 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PRKCEQ02156 737 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 LRRC14Q15048 493 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 POTEAQ6S8J7 498 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 C3orf67Q6ZVT6 689 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CDR2LQ86X02 465 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 OSCP1Q8WVF1 389 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 GFM2Q969S9 779 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 KCNK16Q96T55 309 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 RMND5AQ9H871 391 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 FBXO28Q9NVF7 368 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 APEX2Q9UBZ4 518 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PCDHB12Q9Y5F1 795 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CFAP73A6NFT4 308 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 FAM47DPA6NHR8 397 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ATP6V1C1P21283 382 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 YWHAQP27348 245 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 SYCP2LQ5T4T6 812 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ARHGAP17Q68EM7 881 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CYP4Z1Q86W10 505 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 CARNMT1Q8N4J0 409 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 C1orf131Q8NDD1 294 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ACER1Q8TDN7 264 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 MOV10L1Q9BXT6 1211 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 ARMC7Q9H6L4 198 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 KRT84Q9NSB2 600 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 SMARCAL1Q9NZC9 954 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 PNMA8BQ9ULN7 279 aaPredicted RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 UBQLN1Q9UMX0 589 aaKnown RBP9.29□□□□□ -0.92
CTNND1-208ENST00000428599 TAF6LQ9Y6J9 622 aa9.29□□□□□ -0.92
CTNND1-208ENST00000428599 TBX3O15119 743 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TBC1D12O60347 775 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 GEMP55040 296 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SNRPFP62306 86 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 KDSRQ06136 332 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SNRNP35Q16560 246 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SNX30Q5VWJ9 437 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 KRT77Q7Z794 578 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 IFNEQ86WN2 208 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 DHX40Q8IX18 779 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 KCNV2Q8TDN2 545 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RNPC3Q96LT9 517 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 MXRA8Q9BRK3 442 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 MFSD1Q9H3U5 465 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 ALG13Q9NP73 1137 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PSMC3IPQ9P2W1 217 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 ITIH6Q6UXX5 1313 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TNNI3P19429 210 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RPL10AP62906 217 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 AK9Q5TCS8 1911 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 IFNLR1Q8IU57 520 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 DTX3LQ8TDB6 740 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 THAP11Q96EK4 314 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 WNK4Q96J92 1243 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RTFDC1Q9BY42 306 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TRIM8Q9BZR9 551 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PCMTD2Q9NV79 361 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 KLHL2O95198 593 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 BMP10O95393 424 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SUPT20HL2P0C7V6 817 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 CYP2C8P10632 490 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 CKBP12277 381 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 C4BPBP20851 252 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 FGFR2P21802 821 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PTPN7P35236 360 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 AVPR1AP37288 418 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 GGCXP38435 758 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PLA2G4FQ68DD2 849 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 XRRA1Q6P2D8 792 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PCSK9Q8NBP7 692 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SLC20A1Q8WUM9 679 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 FAR2Q96K12 515 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RPRD1AQ96P16 312 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 MAP3K14Q99558 947 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 STK33Q9BYT3 514 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RANBP17Q9H2T7 1088 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TRPM5Q9NZQ8 1165 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PLA2G4CQ9UP65 541 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 VPS26AO75436 327 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 ERN1O75460 977 aaKnown RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 CKMP06732 381 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PTGER2P43116 358 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 KPNA1P52294 538 aaPredicted RBP9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PLD1Q13393 1074 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 PWP1Q13610 501 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 MRNIPQ6NTE8 343 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 MTSS1LQ765P7 747 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 ITIH5Q86UX2 942 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 FAM9CQ8IZT9 166 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 CCSER1Q9C0I3 900 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 IL25Q9H293 177 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 TUBGCP4Q9UGJ1 667 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 ARHGAP23Q9P227 1491 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RNF103O00237 685 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 FGFR4P22455 802 aa9.28□□□□□ -0.92
CTNND1-208ENST00000428599 RAD23BP54727 409 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms