RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 hCG_1818297A0A087WSY0 165 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 CLRN2A0PK11 232 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 F8VP50 259 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 KRT3P12035 628 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 RPL7AP62424 266 aaKnown RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 MTERF2Q49AM1 385 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 MAP7D3Q8IWC1 876 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 ANKLE1Q8NAG6 615 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 ASCC2Q9H1I8 757 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 SMYD3Q9H7B4 428 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 MARCOQ9UEW3 520 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 CCDC195A0A1B0GUA6 201 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 F8W8V4 182 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 GRIN3BO60391 1043 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 PIAS1O75925 651 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 HSPA1LP34931 641 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 ZACNQ401N2 412 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 FAM71DQ8N9W8 422 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 GLIS1Q8NBF1 620 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 SLC26A7Q8TE54 656 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 POLR3FQ9H1D9 316 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 PCSK1NQ9UHG2 260 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 KLHL33A6NCF5 533 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 RTN3O95197 1032 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 EPHB1P54762 984 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 ROR1Q01973 937 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 PSMD6Q15008 389 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 PPP1R15BQ5SWA1 713 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 NET1Q7Z628 596 aaPredicted RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 SLC26A11Q86WA9 606 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 BANPQ8N9N5 519 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 PIP4K2CQ8TBX8 421 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 EURLQ9NYK6 297 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 STRCP1A6NGW2 1772 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 UMODL1Q5DID0 1318 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 GSTT1P30711 240 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 STIP1P31948 543 aaKnown RBP11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 FAAP100Q0VG06 881 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 ASPHQ12797 758 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 STX3Q13277 289 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 CHI3L2Q15782 390 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 SMTNL2Q2TAL5 461 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 HSP90AA5PQ58FG0 334 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 CHSY1Q86X52 802 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 RDM1Q8NG50 284 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 HSPH1Q92598 858 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 CCDC28BQ9BUN5 200 aa11.25□□□□□ -0.61
ATP2C1-204ENST00000428331 FAM237BA0A1B0GVD1 139 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 TMEM191CA6NGB0 347 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 MED7O43513 233 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 MAGEC1O60732 1142 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 LSM8O95777 96 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ICAM1P05362 532 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 TMEM191BP0C7N4 346 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ELK3P41970 407 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 RAB27AP51159 221 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 EFTUD2Q15029 972 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 GRAMD1BQ3KR37 738 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SDCCAG8Q86SQ7 713 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 THNSL1Q8IYQ7 743 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 TMEM174Q8WUU8 243 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 MIPEPQ99797 713 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 DMAP1Q9NPF5 467 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 IRAK4Q9NWZ3 460 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ASTN2O75129 1339 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 DNAJC6O75061 913 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ANPEPP15144 967 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 PSMC1P62191 440 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 KRT81Q14533 505 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 GPAT2Q6NUI2 795 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SWSAP1Q6NVH7 229 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 RINLQ6ZS11 566 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ARHGAP22Q7Z5H3 698 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SPATA18Q8TC71 538 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SRPK1Q96SB4 655 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ZNF518BQ9C0D4 1074 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 NMUR2Q9GZQ4 415 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 KLC2Q9H0B6 622 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 C12orf65Q9H3J6 166 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 FAM96AQ9H5X1 160 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 CYP26B1Q9NR63 512 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SNCAIPQ9Y6H5 919 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 RPL22P35268 128 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 RPS6KA3P51812 740 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SH3BP5LQ7L8J4 393 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 SLC7A3Q8WY07 619 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 FRMD8Q9BZ67 464 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ZC3H7BQ9UGR2 993 aaKnown RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 BCAP29Q9UHQ4 241 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 PCDHAC2Q9Y5I4 1007 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 ASNSP08243 561 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 AQP5P55064 265 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 LRRC36Q1X8D7 754 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 AMIGO3Q86WK7 504 aa11.24□□□□□ -0.61
ATP2C1-204ENST00000428331 NLGN1Q8N2Q7 840 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms