RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 IGKV6D-41A0A0C4DH26 115 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 DNALI1O14645 258 aaPredicted RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 PRDX5P30044 214 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CHN2P52757 468 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 TUBB3Q13509 450 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ZNF829Q3KNS6 432 aaPredicted RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 KBTBD12Q3ZCT8 623 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 SFT2D3Q587I9 215 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 LRRC38Q5VT99 294 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 USP17L2Q6R6M4 530 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 TOM1L2Q6ZVM7 507 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 FBXL18Q96ME1 805 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 NRDE2Q9H7Z3 1164 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PCDH9Q9HC56 1237 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PTBP2Q9UKA9 531 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 SCN10AQ9Y5Y9 1956 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 EIF4E1BA6NMX2 242 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 GAP43P17677 238 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CHRNDQ07001 517 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CYS1Q717R9 158 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 KREMEN1Q96MU8 473 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 TDRD1Q9BXT4 1180 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 GIN1Q9NXP7 522 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 STK39Q9UEW8 545 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 G3BP2Q9UN86 482 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 B2RBV5 119 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PPIDQ08752 370 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 STX3Q13277 289 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CCDC110Q8TBZ0 833 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PIGBQ92521 554 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 DCLK3Q9C098 648 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 RMI1Q9H9A7 625 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ANAPC5Q9UJX4 755 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 RAB26Q9ULW5 256 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CLDN3O15551 220 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 SESN3P58005 492 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CLDN10P78369 228 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 WASHC5Q12768 1159 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 MESDQ14696 234 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PKN2Q16513 984 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 FAM47AQ5JRC9 791 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ARCQ7LC44 396 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 TMC7Q7Z402 723 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 SATL1Q86VE3 508 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 GPBP1Q86WP2 473 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 THTPAQ9BU02 230 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 MAK16Q9BXY0 300 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 DCTN4Q9UJW0 460 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ZBTB1Q9Y2K1 713 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 OATP04181 439 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ZNF12P17014 697 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ZBTB16Q05516 673 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 FAAP100Q0VG06 881 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 EPC2Q52LR7 807 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CFAP157Q5JU67 520 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 RABGAP1LQ5R372 815 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 STXBP5Q5T5C0 1151 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PCDHB13Q9Y5F0 798 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 MED24O75448 989 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 ARFIP2P53365 341 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 LPIN1Q14693 890 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 FYB2Q5VWT5 728 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 GPIHBP1Q8IV16 184 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 NAT8LQ8N9F0 302 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 NTPCRQ9BSD7 190 aaKnown RBP5.38□□□□□ -1.55
RIF1-203ENST00000428287 KLHL4Q9C0H6 718 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 RIMS3Q9UJD0 308 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 CNTN6Q9UQ52 1028 aa5.38□□□□□ -1.55
RIF1-203ENST00000428287 PLXNA4Q9HCM2 1894 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CDH23Q9H251 3354 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 TMEM247A6NEH6 219 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SDR42E2A6NKP2 422 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 FBP2O00757 339 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CALUO43852 315 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 POLR2MP0CAP2 368 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MMP8P22894 467 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 IGHMBP2P38935 993 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 MAGEA6P43360 314 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 GPC3P51654 580 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 PDK3Q15120 406 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 P3H1Q32P28 736 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF554Q86TJ5 538 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 SLFN12Q8IYM2 578 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF420Q8TAQ5 688 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 SLC44A1Q8WWI5 657 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 MCM9Q9NXL9 1143 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CNOT11Q9UKZ1 510 aaKnown RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.37□□□□□ -1.55
RIF1-203ENST00000428287 GPC6Q9Y625 555 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 AHCTF1Q8WYP5 2266 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 USP17L3A6NCW0 530 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 USP17L4A6NCW7 530 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 E5RJQ4 531 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ADSLP30566 484 aaPredicted RBP5.37□□□□□ -1.55
RIF1-203ENST00000428287 PSMC6P62333 389 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 ZNF543Q08ER8 600 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 CES4AQ5XG92 561 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 FBXL19Q6PCT2 694 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 KLHDC10Q6PID8 442 aa5.37□□□□□ -1.55
RIF1-203ENST00000428287 POTEGQ6S5H5 508 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms