RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 CPNE8Q86YQ8 564 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 SLC39A11Q8N1S5 342 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 RNF10Q8N5U6 811 aaKnown RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 LRRC57Q8N9N7 239 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 ANKRD52Q8NB46 1076 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 MSANTD4Q8NCY6 345 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 MYCBPAPQ8TBZ2 947 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 IGSF21Q96ID5 467 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 SLC9A7Q96T83 725 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 NAPGQ99747 312 aaPredicted RBP12.75□□□□□ -0.37
RFC4-206ENST00000427785 ACBD6Q9BR61 282 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 ZBED2Q9BTP6 218 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 TRIM7Q9C029 511 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 ANAPC7Q9UJX3 599 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 HYOU1Q9Y4L1 999 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 PCDHGC5Q9Y5F6 944 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 SLC4A7Q9Y6M7 1214 aa12.75□□□□□ -0.37
RFC4-206ENST00000427785 OBSL1O75147 1896 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 ENC1O14682 589 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 AP1G2O75843 785 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 MTA2O94776 668 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 ATP1A1P05023 1023 aaKnown RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 ATP2A2P16615 1042 aaKnown RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 NPR3P17342 541 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 DNA2P51530 1060 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 HTRA4P83105 476 aaPredicted RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 SLC39A12Q504Y0 691 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 PLEKHA7Q6IQ23 1121 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 PMF1Q6P1K2 205 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 PRSS55Q6UWB4 352 aaPredicted RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 CLEC20AQ6ZU45 233 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 FAM183BPQ6ZVS7 135 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 LRRTM3Q86VH5 581 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 XYLT1Q86Y38 959 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 HERC6Q8IVU3 1022 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 KIF18AQ8NI77 898 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 PIWIL1Q96J94 861 aaKnown RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 MCEEQ96PE7 176 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 ZCWPW1Q9H0M4 648 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 METTL5Q9NRN9 209 aaKnown RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 TMEM30AQ9NV96 361 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 UVRAGQ9P2Y5 699 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 STRIP2Q9ULQ0 834 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 PACSIN2Q9UNF0 486 aaPredicted RBP12.74□□□□□ -0.37
RFC4-206ENST00000427785 SCINQ9Y6U3 715 aa12.74□□□□□ -0.37
RFC4-206ENST00000427785 TCRBV5S1A1TA0A578 114 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 LCHNA4D1U4 455 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 CTAGE9A4FU28 777 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 XPO1O14980 1071 aaKnown RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 GABBR2O75899 941 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 BEST1O76090 585 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 OAZ2O95190 189 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 CPB1P15086 417 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 MAGEA10P43363 369 aaPredicted RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 PLA2G4AP47712 749 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 HADHBP55084 474 aaKnown RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 ARPP19P56211 112 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 MAP3K7CLP57077 242 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 PLCB3Q01970 1234 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 MAMLD1Q13495 774 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 MESDQ14696 234 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 TCEAL1Q15170 157 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 C9orf50Q5SZB4 431 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 FAM102AQ5T9C2 384 aaPredicted RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 OR6B2Q6IFH4 312 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 C11orf63Q6NUN7 778 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 FAM171BQ6P995 826 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 DAAM2Q86T65 1068 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 RNF168Q8IYW5 571 aaPredicted RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 FIBCD1Q8N539 461 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 C3orf20Q8ND61 904 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 SLC35F5Q8WV83 523 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 RIN2Q8WYP3 895 aaPredicted RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 C18orf8Q96DM3 657 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 SMARCD1Q96GM5 515 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 TMEM169Q96HH4 297 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 VCPIP1Q96JH7 1222 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 SMOQ99835 787 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 TTPALQ9BTX7 342 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 SELENOOQ9BVL4 669 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 HERC2P3Q9BVR0 1158 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 SLC4A5Q9BY07 1137 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 DUSP16Q9BY84 665 aa12.73□□□□□ -0.37
RFC4-206ENST00000427785 MTIF3Q9H2K0 278 aaKnown RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 ABI2Q9NYB9 513 aaPredicted RBP12.73□□□□□ -0.37
RFC4-206ENST00000427785 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
RFC4-206ENST00000427785 OR6C75A6NL08 312 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 C2CD2LO14523 706 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 TLL1O43897 1013 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 URI1O94763 535 aaPredicted RBP12.72□□□□□ -0.37
RFC4-206ENST00000427785 EFEMP2O95967 443 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 TUBB4AP04350 444 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 LCP1P13796 627 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 BDNFP23560 247 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 GABRB2P47870 512 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 GSCP56915 257 aaPredicted RBP12.72□□□□□ -0.37
RFC4-206ENST00000427785 RPL7AP62424 266 aaKnown RBP12.72□□□□□ -0.37
RFC4-206ENST00000427785 ADIGQ0VDE8 80 aa12.72□□□□□ -0.37
RFC4-206ENST00000427785 MRPL58Q14197 206 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms