RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 XKR3Q5GH77 459 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PLA2G4FQ68DD2 849 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 ULK2Q8IYT8 1036 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 CDK5RAP1Q96SZ6 601 aaKnown RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 RWDD3Q9Y3V2 267 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 ETFBP38117 255 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 HNMTP50135 292 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 ALDH6A1Q02252 535 aaKnown RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PTGISQ16647 500 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 TTLL6Q8N841 843 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 DBNDD1Q9H9R9 158 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 KLHL28Q9NXS3 571 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 VTI1BQ9UEU0 232 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 WWP2O00308 870 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 CD2BP2O95400 341 aaKnown RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PRKCBP05771 671 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 TTKP33981 857 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PRDM15P57071 1507 aaPredicted RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 POLG2Q9UHN1 485 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 BCL10O95999 233 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PDK2Q15119 407 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 IER5Q5VY09 327 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PCNX4Q63HM2 1172 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PEG10Q86TG7 708 aaKnown RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 USP38Q8NB14 1042 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 MARCOQ9UEW3 520 aaPredicted RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 TNFAIP8O95379 198 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 ADRA2BP18089 450 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 TSGA10IPQ3SY00 556 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 PLEKHA7Q6IQ23 1121 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 CDK20Q8IZL9 346 aa14.96□□□□□ -0.01
PTPN13-203ENST00000427191 WDR36Q8NI36 951 aaKnown RBP14.96□□□□□ -0.01
PTPN13-203ENST00000427191 LOC102724159A0A0B4J2E5 919 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 GPD1P21695 349 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 PWP2Q15269 919 aaKnown RBP14.96□□□□□ -0.02
PTPN13-203ENST00000427191 SNRNP35Q16560 246 aaKnown RBP14.96□□□□□ -0.02
PTPN13-203ENST00000427191 OR8H2Q8N162 312 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 RNF112Q9ULX5 631 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 SH3BP1Q9Y3L3 701 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 TMEM114B3SHH9 223 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 CYP26A1O43174 497 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 UBTFL6P0CB48 400 aaPredicted RBP14.96□□□□□ -0.02
PTPN13-203ENST00000427191 PABPC1P11940 636 aaKnown RBP14.96□□□□□ -0.02
PTPN13-203ENST00000427191 MLH1P40692 756 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 ENKURQ8TC29 256 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 YIPF2Q9BWQ6 316 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 ARAP3Q8WWN8 1544 aa14.96□□□□□ -0.02
PTPN13-203ENST00000427191 PHF20L1A8MW92 1017 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ITGAXP20702 1163 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 CD3EAPO15446 510 aaKnown RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ZW10O43264 779 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 UCHL3P15374 230 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 NQO1P15559 274 aaKnown RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 MCAMP43121 646 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 C2CD6Q53TS8 623 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 MDH1BQ5I0G3 518 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ADGRF4Q8IZF3 695 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 SH3BP4Q9P0V3 963 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 QRICH2Q9H0J4 1663 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 FAM25AB3EWG3 89 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 FAM25CB3EWG5 89 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 FAM25GB3EWG6 89 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 CYB5D1Q6P9G0 228 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 PPP1R14AQ96A00 147 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 PABPC5Q96DU9 382 aaKnown RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 SLITRK1Q96PX8 696 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 CINPQ9BW66 212 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 TRIM9Q9C026 710 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 METP08581 1390 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ADCY10Q96PN6 1610 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 E9PBE3 544 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 KRT34O76011 436 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ATP6V1B1P15313 513 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 POLD3Q15054 466 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 IL31Q6EBC2 164 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 COPS7BQ9H9Q2 264 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 NCAM2O15394 837 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 RHOBTB3O94955 611 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 TGM2P21980 687 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 SKP1P63208 163 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ARHGAP15Q53QZ3 475 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 DENND1BQ6P3S1 775 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 NEK6Q9HC98 313 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 TAGLN3Q9UI15 199 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 CRLS1Q9UJA2 301 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 PIPSLA2A3N6 862 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 SARSP49591 514 aaKnown RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 WDR41Q9HAD4 459 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 ALG13Q9NP73 1137 aaKnown RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 NCKIPSDQ9NZQ3 722 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 SPATA2Q9UM82 520 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 TPRKBQ9Y3C4 175 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 NEDD4P46934 1319 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 PNPLA7Q6ZV29 1317 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 USP6P35125 1406 aa14.95□□□□□ -0.02
PTPN13-203ENST00000427191 RSBN1Q5VWQ0 802 aaPredicted RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 PABPC3Q9H361 631 aaKnown RBP14.95□□□□□ -0.02
PTPN13-203ENST00000427191 RARBP10826 455 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms