RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 HSD3B7Q9H2F3 369 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 ZNF334Q9HCZ1 680 aaPredicted RBP13.32□□□□□ -0.28
SMIM12-203ENST00000426886 ASGR2P07307 311 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PON1P27169 355 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 RAD23BP54727 409 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PTPN21Q16825 1174 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PAQR9Q6ZVX9 377 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 RTL10Q7L3V2 364 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 CRYBG2Q8N1P7 616 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 FGF13Q92913 245 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PSMG2Q969U7 264 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 ACSF2Q96CM8 615 aaPredicted RBP13.32□□□□□ -0.28
SMIM12-203ENST00000426886 TMEM176AQ96HP8 235 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 FUBP3Q96I24 572 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMIM12-203ENST00000426886 SLITRK6Q9H5Y7 841 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 PRKAG3Q9UGI9 489 aa13.32□□□□□ -0.28
SMIM12-203ENST00000426886 C2orf16Q68DN1 1984 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 AP1G2O75843 785 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 BEST1O76090 585 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 CD19P15391 556 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 USP8P40818 1118 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 RPL10AP62906 217 aaKnown RBP13.31□□□□□ -0.28
SMIM12-203ENST00000426886 PPP1R26Q5T8A7 1209 aaPredicted RBP13.31□□□□□ -0.28
SMIM12-203ENST00000426886 CYP26C1Q6V0L0 522 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 OTOP3Q7RTS5 596 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 TDRD5Q8NAT2 981 aaKnown RBP13.31□□□□□ -0.28
SMIM12-203ENST00000426886 SLC4A11Q8NBS3 891 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 KREMEN1Q96MU8 473 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 ATXN3LQ9H3M9 355 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 CBX8Q9HC52 389 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 ABCB6Q9NP58 842 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 KRT82Q9NSB4 513 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 NR2E1Q9Y466 385 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 SMTNL1A8MU46 457 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
SMIM12-203ENST00000426886 KRT5P13647 590 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 CEBPBP17676 345 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 TBXAS1P24557 533 aaPredicted RBP13.31□□□□□ -0.28
SMIM12-203ENST00000426886 ANXA13P27216 316 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 GABRR2P28476 465 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 MAP3K7CLP57077 242 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 STXBP5Q5T5C0 1151 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 POTEHQ6S545 545 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 ITIH5Q86UX2 942 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 FAM35AQ86V20 835 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 ANKRD20A12PQ8NF67 263 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 HSFX1Q9UBD0 423 aa13.31□□□□□ -0.28
SMIM12-203ENST00000426886 TRIM21P19474 475 aaKnown RBP13.3□□□□□ -0.28
SMIM12-203ENST00000426886 KLK7P49862 253 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 COPB1P53618 953 aaKnown RBP13.3□□□□□ -0.28
SMIM12-203ENST00000426886 KCNMA1Q12791 1236 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 VSTM1Q6UX27 236 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 RSAD2Q8WXG1 361 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMIM12-203ENST00000426886 SLC38A8A6NNN8 435 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 LOC730098B7Z3J9 87 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 ZNF18P17022 549 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 PDE4CQ08493 712 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 IQCB1Q15051 598 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 TEAD2Q15562 447 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 TMC8Q8IU68 726 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 KHSRPQ92945 711 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMIM12-203ENST00000426886 PCMTD1Q96MG8 357 aaPredicted RBP13.3□□□□□ -0.28
SMIM12-203ENST00000426886 ACP6Q9NPH0 428 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 ASB3Q9Y575 518 aa13.3□□□□□ -0.28
SMIM12-203ENST00000426886 PNMA6AP0CW24 399 aaPredicted RBP13.29□□□□□ -0.28
SMIM12-203ENST00000426886 LAMP2P13473 410 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 HMGA1P17096 107 aaKnown RBP13.29□□□□□ -0.28
SMIM12-203ENST00000426886 ACO1P21399 889 aaKnown RBP13.29□□□□□ -0.28
SMIM12-203ENST00000426886 MAGEA11P43364 429 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 USP46P62068 366 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 CYP4F8P98187 520 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 RNF135Q8IUD6 432 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 NPAS3Q8IXF0 933 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 TTC16Q8NEE8 873 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 SMARCD1Q96GM5 515 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 ZSWIM3Q96MP5 696 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 BPIFA3Q9BQP9 254 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 LSM14BQ9BX40 385 aaKnown RBP13.29□□□□□ -0.28
SMIM12-203ENST00000426886 LRRC3Q9BY71 257 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 APEX2Q9UBZ4 518 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 MUTYHQ9UIF7 546 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 AJAP1Q9UKB5 411 aaPredicted RBP13.29□□□□□ -0.28
SMIM12-203ENST00000426886 CDH7Q9ULB5 785 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 USTQ9Y2C2 406 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 MOSPD3O75425 235 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 PAPLNO95428 1278 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 ABL1P00519 1130 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 YWHAEP62258 255 aaKnown RBP13.29□□□□□ -0.28
SMIM12-203ENST00000426886 GCNT1Q02742 428 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 UBXN1Q04323 297 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 RAPGEF1Q13905 1077 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 PRSS36Q5K4E3 855 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 DENND5BQ6ZUT9 1274 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 SCAMP5Q8TAC9 235 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 FAXDC2Q96IV6 333 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 SMOQ99835 787 aa13.29□□□□□ -0.28
SMIM12-203ENST00000426886 DNAJC12Q9UKB3 198 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms