RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 WHAMMQ8TF30 809 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 SPATA17Q96L03 361 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 C8orf48Q96LL4 319 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 ASB16Q96NS5 453 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 ARID3AQ99856 593 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 KXD1Q9BQD3 176 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 ATP8B3O60423 1300 aa19.17■□□□□ 0.66
HERC3-205ENST00000426683 TMEM221A6NGB7 291 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 M0R296 226 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 CCDC130P13994 396 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 CUL2Q13617 745 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 ZNF394Q53GI3 561 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 CT47A1Q5JQC4 288 aaPredicted RBP19.16■□□□□ 0.66
HERC3-205ENST00000426683 GPR158Q5T848 1215 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 TANGO2Q6ICL3 276 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 PAQR9Q6ZVX9 377 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 IRF2BP1Q8IU81 584 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 FUKQ8N0W3 1084 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 TTC39CQ8N584 583 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 C12orf29Q8N999 325 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 SMARCD2Q92925 531 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 TRMT2BQ96GJ1 504 aaKnown RBP19.16■□□□□ 0.66
HERC3-205ENST00000426683 CEP295NLQ96MC4 621 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 THAP9Q9H5L6 903 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 CISHQ9NSE2 258 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 FAM49BQ9NUQ9 324 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 TMEM30AQ9NV96 361 aa19.16■□□□□ 0.66
HERC3-205ENST00000426683 UXTQ9UBK9 157 aaPredicted RBP19.16■□□□□ 0.66
HERC3-205ENST00000426683 ECI2O75521 394 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 F11P03951 625 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 FCARP24071 287 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 SASS6Q6UVJ0 657 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 DENND5BQ6ZUT9 1274 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 TMEM150AQ86TG1 271 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 SLC2A14Q8TDB8 520 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 ELSPBP1Q96BH3 223 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 ASIC4Q96FT7 647 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 SMARCD1Q96GM5 515 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 MYRFLQ96LU7 910 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 NT5C1BQ96P26 610 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 LRFN3Q9BTN0 628 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 PLA2G2FQ9BZM2 168 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 DNAI2Q9GZS0 605 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 ZFP14Q9HCL3 533 aa19.15■□□□□ 0.66
HERC3-205ENST00000426683 PRR33A8MZF0 331 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 AP1G2O75843 785 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 SRFP11831 508 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 ADORA2BP29275 332 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 MTIF2P46199 727 aaKnown RBP19.14■□□□□ 0.65
HERC3-205ENST00000426683 FAM114A1Q8IWE2 563 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 EHBP1Q8NDI1 1231 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 LMO3Q8TAP4 145 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 KCNK16Q96T55 309 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 FAM124BQ9H5Z6 455 aaPredicted RBP19.14■□□□□ 0.65
HERC3-205ENST00000426683 TASP1Q9H6P5 420 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 KRT82Q9NSB4 513 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 TMEM63CQ9P1W3 806 aa19.14■□□□□ 0.65
HERC3-205ENST00000426683 TADA3O75528 432 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 CFHP08603 1231 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 TBXAS1P24557 533 aaPredicted RBP19.13■□□□□ 0.65
HERC3-205ENST00000426683 VIPR2P41587 438 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 USP46P62068 366 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 YWHAEP62258 255 aaKnown RBP19.13■□□□□ 0.65
HERC3-205ENST00000426683 HSP90AA4PQ58FG1 418 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 GPIHBP1Q8IV16 184 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 MRPS31Q92665 395 aaKnown RBP19.13■□□□□ 0.65
HERC3-205ENST00000426683 CYFIP2Q96F07 1278 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 TMEM176AQ96HP8 235 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 HEXIM2Q96MH2 286 aaKnown RBP19.13■□□□□ 0.65
HERC3-205ENST00000426683 HNRNPABQ99729 332 aaKnown RBP19.13■□□□□ 0.65
HERC3-205ENST00000426683 TRPV4Q9HBA0 871 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 DMAP1Q9NPF5 467 aaPredicted RBP19.13■□□□□ 0.65
HERC3-205ENST00000426683 ANO10Q9NW15 660 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 EHD2Q9NZN4 543 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 FBXL21Q9UKT6 434 aa19.13■□□□□ 0.65
HERC3-205ENST00000426683 DDX6P26196 483 aaKnown RBP eCLIP19.12■□□□□ 0.65
HERC3-205ENST00000426683 RAD23BP54727 409 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 GPC5P78333 572 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 IFRD2Q12894 506 aaPredicted RBP19.12■□□□□ 0.65
HERC3-205ENST00000426683 ARID3BQ8IVW6 561 aaPredicted RBP19.12■□□□□ 0.65
HERC3-205ENST00000426683 NUP93Q8N1F7 819 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 PPM1KQ8N3J5 372 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 MAB21L3Q8N8X9 362 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 SLC4A11Q8NBS3 891 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 SMOQ99835 787 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 TTLL2Q9BWV7 592 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 SLC46A2Q9BY10 475 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 INTS2Q9H0H0 1204 aaKnown RBP19.12■□□□□ 0.65
HERC3-205ENST00000426683 SLC2A4RGQ9NR83 387 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 MYO10Q9HD67 2058 aa19.12■□□□□ 0.65
HERC3-205ENST00000426683 BEST1O76090 585 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 FAM200BP0CF97 657 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 MAP3K7CLP57077 242 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 GRM2Q14416 872 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 STX1AQ16623 288 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 PPP1R26Q5T8A7 1209 aaPredicted RBP19.11■□□□□ 0.65
HERC3-205ENST00000426683 TXNDC8Q6A555 127 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 CAVIN1Q6NZI2 390 aaKnown RBP19.11■□□□□ 0.65
HERC3-205ENST00000426683 VITQ6UXI7 678 aa19.11■□□□□ 0.65
HERC3-205ENST00000426683 C11orf57Q6ZUT1 292 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms