RNA–Protein interactions for RNA: ENST00000425967.7

FGFR1-211, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best) BASIC

Gene FGFR1, Length 5,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-211ENST00000425967 GFM2Q969S9 779 aaKnown RBP13.11□□□□□ -0.31
FGFR1-211ENST00000425967 MROH8Q9H579 483 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 MANSC1Q9H8J5 431 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 SMARCAL1Q9NZC9 954 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 F8W810 466 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
FGFR1-211ENST00000425967 RNASEH1O60930 286 aaKnown RBP13.11□□□□□ -0.31
FGFR1-211ENST00000425967 VDRP11473 427 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 PPP4CP60510 307 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 TIGD7Q6NT04 549 aaPredicted RBP13.11□□□□□ -0.31
FGFR1-211ENST00000425967 CCNJLQ8IV13 435 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 FBXO32Q969P5 355 aa13.11□□□□□ -0.31
FGFR1-211ENST00000425967 DDX28Q9NUL7 540 aaKnown RBP13.11□□□□□ -0.31
FGFR1-211ENST00000425967 UBXN8O00124 270 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CNTN1Q12860 1018 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CACHD1Q5VU97 1274 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 KRT78Q8N1N4 520 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 BLOC1S5Q8TDH9 187 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 RIN2Q8WYP3 895 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CCT8L2Q96SF2 557 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 EMILIN2Q9BXX0 1053 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 TTLL13PA6NNM8 815 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 VCLP18206 1134 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 TGM2P21980 687 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CAP2P40123 477 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 NAMPTP43490 491 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 MROH9Q5TGP6 573 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CHMP1BQ7LBR1 199 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-211ENST00000425967 THTPAQ9BU02 230 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 DSEQ9UL01 958 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 IPPQ9Y573 584 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 PRIM2P49643 509 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 MPZL3Q6UWV2 235 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 TRIM69Q86WT6 500 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 P3H2Q8IVL5 708 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 ARRDC4Q8NCT1 418 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 ERP27Q96DN0 273 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 ISCUQ9H1K1 167 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 IL25Q9H293 177 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 B2RBV5 119 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CHI3L2Q15782 390 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 KBTBD12Q3ZCT8 623 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 CDR2LQ86X02 465 aaPredicted RBP13.1□□□□□ -0.31
FGFR1-211ENST00000425967 PCSK9Q8NBP7 692 aaKnown RBP13.1□□□□□ -0.31
FGFR1-211ENST00000425967 DNAJC7Q99615 494 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 APPL1Q9UKG1 709 aa13.1□□□□□ -0.31
FGFR1-211ENST00000425967 COPG1Q9Y678 874 aaKnown RBP13.1□□□□□ -0.31
FGFR1-211ENST00000425967 PRR23D1E9PI22 279 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 VPS26AO75436 327 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 PRR23D2P0DMB1 279 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 FNTAP49354 379 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 CENPAP49450 140 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 CSE1LP55060 971 aaKnown RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 UBE3AQ05086 875 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 PDK2Q15119 407 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 GLRA4Q5JXX5 417 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ERGIC2Q96RQ1 377 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ECSITQ9BQ95 431 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 NMRK2Q9NPI5 230 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ENTPD7Q9NQZ7 604 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 CHST12Q9NRB3 414 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 PHF20L1A8MW92 1017 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ADCY3O60266 1144 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 GYPCP04921 128 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 PMS1P54277 932 aaKnown RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 OXCT1P55809 520 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ERO1BQ86YB8 467 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ZCWPW1Q9H0M4 648 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ASCC2Q9H1I8 757 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 TRPM5Q9NZQ8 1165 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 IQGAP3Q86VI3 1631 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 URODP06132 367 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ZKSCAN4Q969J2 545 aaPredicted RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 CCDC126Q96EE4 140 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 SCAF8Q9UPN6 1271 aaKnown RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 UBE2Q2LH0YL09 131 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 CYB561D2O14569 222 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 CTDNEP1O95476 244 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 YY1P25490 414 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 KCNJ1P48048 391 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 ERFP50548 548 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 STX5Q13190 355 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 UNC45BQ8IWX7 931 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 HOMEZQ8IX15 550 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 OR2W6PQ8NHA6 318 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 BHMTQ93088 406 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 FAR2Q96K12 515 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 IL1RL2Q9HB29 575 aa13.09□□□□□ -0.31
FGFR1-211ENST00000425967 EXOSC4Q9NPD3 245 aaKnown RBP13.09□□□□□ -0.31
FGFR1-211ENST00000425967 TRIM49D1C9J1S8 452 aa13.08□□□□□ -0.31
FGFR1-211ENST00000425967 DDHD2O94830 711 aa13.08□□□□□ -0.31
FGFR1-211ENST00000425967 FBXO21O94952 628 aa13.08□□□□□ -0.31
FGFR1-211ENST00000425967 CKMP06732 381 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms