RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 CCDC186Q7Z3E2 898 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 ZNF804AQ7Z570 1209 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 RSPH3Q86UC2 560 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 SLC44A2Q8IWA5 706 aaPredicted RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 AHI1Q8N157 1196 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 AADATQ8N5Z0 425 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 LILRA3Q8N6C8 439 aaPredicted RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 GBP7Q8N8V2 638 aaPredicted RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 GPR150Q8NGU9 434 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 ZNF606Q8WXB4 792 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 DNAAF4Q8WXU2 420 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 LINC00476Q8WZB0 136 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 MRPL9Q9BYD2 267 aaKnown RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 SERHL2Q9H4I8 314 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 SYNCQ9H7C4 482 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 VCPKMTQ9H867 229 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 UPF2Q9HAU5 1272 aaKnown RBP3.15□□□□□ -1.9
PMS1-209ENST00000424059 ATP6V0A4Q9HBG4 840 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 GPR108Q9NPR9 543 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 AKIP1Q9NQ31 210 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 IL20Q9NYY1 176 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 AIPL1Q9NZN9 384 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 POLKQ9UBT6 870 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 MSRAQ9UJ68 235 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 CCPG1Q9ULG6 757 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 COX11Q9Y6N1 276 aa3.15□□□□□ -1.9
PMS1-209ENST00000424059 LACTBL1A8MY62 500 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 PLOD2O00469 737 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 CASQ2O14958 399 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 NCAM2O15394 837 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 KCNJ13O60928 360 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 NBNO60934 754 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 ZNF189O75820 626 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 ASMTLO95671 621 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 GASTP01350 101 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TPM1P09493 284 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 HKR1P10072 659 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 APOBEC3AP31941 199 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 LSSP48449 732 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 NEK2P51955 445 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 KPNA1P52294 538 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 LIMK1P53667 647 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TPD52P55327 224 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 PDE1CQ14123 709 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 NBPF8Q3BBV2 869 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 SH2D4BQ5SQS7 431 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 ZBTB41Q5SVQ8 909 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 INTS8Q75QN2 995 aaKnown RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 GALNT5Q7Z7M9 940 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 HOMER1Q86YM7 354 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TEX11Q8IYF3 940 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 PPM1KQ8N3J5 372 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 LCORLQ8N3X6 602 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 CARNMT1Q8N4J0 409 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 C3orf20Q8ND61 904 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 BEND2Q8NDZ0 799 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 MIPOL1Q8TD10 442 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 AFAP1L1Q8TED9 768 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 GAB3Q8WWW8 586 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 EXOC4Q96A65 974 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 EPSTI1Q96J88 318 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 ZMAT2Q96NC0 199 aaKnown RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 BBC3Q96PG8 261 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 HERC2P3Q9BVR0 1158 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 SLC13A1Q9BZW2 595 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 MRPL46Q9H2W6 279 aaKnown RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 ZNF768Q9H5H4 540 aaKnown RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 STARD7Q9NQZ5 370 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 FANCLQ9NW38 375 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 SYBUQ9NX95 663 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TRPM5Q9NZQ8 1165 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 CFDP1Q9UEE9 299 aaPredicted RBP3.15□□□□□ -1.91
PMS1-209ENST00000424059 ZNF112Q9UJU3 913 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TRAF3IP3Q9Y228 551 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 PRELID1Q9Y255 219 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TMX2Q9Y320 296 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TRIM17Q9Y577 477 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 TIMM22Q9Y584 194 aa3.15□□□□□ -1.91
PMS1-209ENST00000424059 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.15□□□□□ -1.91
PMS1-209ENST00000424059 PIPSLA2A3N6 862 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 EME2A4GXA9 379 aaPredicted RBP3.14□□□□□ -1.91
PMS1-209ENST00000424059 TMEM221A6NGB7 291 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 ENO4A6NNW6 628 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 TMCC2O75069 709 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 CDC45O75419 566 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 FERP16591 822 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 TMOD1P28289 359 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 GALNSP34059 522 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 RAD52P43351 418 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 HTR3AP46098 478 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 PPM1FP49593 454 aaPredicted RBP3.14□□□□□ -1.91
PMS1-209ENST00000424059 MNAT1P51948 309 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 NEK3P51956 506 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 C21orf58P58505 322 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 MRPS35P82673 323 aaKnown RBP3.14□□□□□ -1.91
PMS1-209ENST00000424059 RELQ04864 619 aaPredicted RBP3.14□□□□□ -1.91
PMS1-209ENST00000424059 PPIDQ08752 370 aaKnown RBP3.14□□□□□ -1.91
PMS1-209ENST00000424059 BEAN1Q3B7T3 259 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 TKFCQ3LXA3 575 aa3.14□□□□□ -1.91
PMS1-209ENST00000424059 DALRD3Q5D0E6 543 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms