RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SCINQ9Y6U3 715 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 EXOC1LA0A1B0GW35 172 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 DNM1LO00429 736 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 TSPAN1O60635 241 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FAM155BO75949 473 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 TTC4O95801 387 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FAM107AO95990 144 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 MYL3P08590 195 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 RARBP10826 455 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FNTAP49354 379 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 ZNF132P52740 706 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PKN2Q16513 984 aaKnown RBP12.54□□□□□ -0.4
PTPRN-204ENST00000423636 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
PTPRN-204ENST00000423636 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 PYROXD2Q8N2H3 581 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 CCDC89Q8N998 374 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 STKLD1Q8NE28 680 aa12.54□□□□□ -0.4
PTPRN-204ENST00000423636 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
PTPRN-204ENST00000423636 RASA4BC9J798 803 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 H7C0C1 242 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 RASA4O43374 803 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 ATP5OP48047 213 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 PITX1P78337 314 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-204ENST00000423636 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
PTPRN-204ENST00000423636 CYP1B1Q16678 543 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 CDCA2Q69YH5 1023 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-204ENST00000423636 SPNS2Q8IVW8 549 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 VTI1AQ96AJ9 217 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 SLCO1B3Q9NPD5 702 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 PTPRFP10586 1907 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 LOXHD1Q8IVV2 1947 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 hCG_1818297A0A087WSY0 165 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 IGKV6-21A0A0C4DH24 114 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 RPS6KA5O75582 802 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 CDKN2BP42772 138 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 CTCFP49711 727 aaPredicted RBP12.53□□□□□ -0.4
PTPRN-204ENST00000423636 ERFP50548 548 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 PLPPR4Q7Z2D5 763 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 TEX2Q8IWB9 1127 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 SPATA18Q8TC71 538 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 RSAD2Q8WXG1 361 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 LPPQ93052 612 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 FAM149B1Q96BN6 582 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 TRIM33Q9UPN9 1127 aa12.53□□□□□ -0.4
PTPRN-204ENST00000423636 CCDC78A2IDD5 438 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 GMPRP36959 345 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 SLC1A1P43005 524 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 CRADDP78560 199 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 TFDP3Q5H9I0 405 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 FAM47CQ5HY64 1035 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 ZNF677Q86XU0 584 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 KIF2BQ8N4N8 673 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 ARFGAP2Q8N6H7 521 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 EXD1Q8NHP7 514 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 TLCD1Q96CP7 247 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 TRAIPQ9BWF2 469 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 USP18Q9UMW8 372 aa12.52□□□□□ -0.4
PTPRN-204ENST00000423636 XIRP2A4UGR9 3374 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 LGR5O75473 907 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 TJP3O95049 919 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 CALB1P05937 261 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 HSPA6P17066 643 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 OLIG2Q13516 323 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 DARS2Q6PI48 645 aaKnown RBP12.52□□□□□ -0.41
PTPRN-204ENST00000423636 TADA2BQ86TJ2 420 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 TP53INP2Q8IXH6 220 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 KATNAL2Q8IYT4 538 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 MPHOSPH6Q99547 160 aaKnown RBP12.52□□□□□ -0.41
PTPRN-204ENST00000423636 ABCF3Q9NUQ8 709 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 A8MXQ7 604 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 MYBL1P10243 752 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 RBP3P10745 1247 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 ITIH2P19823 946 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 IRX4P78413 519 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 ACVR2BQ13705 512 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 PTK6Q13882 451 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 CCNG2Q16589 344 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 TTC30AQ86WT1 665 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 IGDCC3Q8IVU1 814 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 TRIM11Q96F44 468 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 CHMP6Q96FZ7 201 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 HAUS2Q9NVX0 235 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 KCNH4Q9UQ05 1017 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 TNFSF13BQ9Y275 285 aa12.52□□□□□ -0.41
PTPRN-204ENST00000423636 SPTLC1O15269 473 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 CYP2C9P11712 490 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 DRD4P21917 467 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 PROZP22891 400 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 EIF3EP60228 445 aaKnown RBP12.51□□□□□ -0.41
PTPRN-204ENST00000423636 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 DNAJC3Q13217 504 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 SLMAPQ14BN4 828 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 RHBDF2Q6PJF5 856 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 PAXIP1Q6ZW49 1069 aaPredicted RBP12.51□□□□□ -0.41
PTPRN-204ENST00000423636 CACNA2D3Q8IZS8 1091 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 CFAP36Q96G28 342 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 MS4A4AQ96JQ5 239 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 RHOBTB2Q9BYZ6 727 aa12.51□□□□□ -0.41
PTPRN-204ENST00000423636 C2orf40Q9H1Z8 148 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms