RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 PAPLNO95428 1278 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 FGF19O95750 216 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 GNA14O95837 355 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 CFHP08603 1231 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 CSH1P0DML2 217 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 CSH2P0DML3 217 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 CCDC130P13994 396 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 ADORA2BP29275 332 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 CDC25CP30307 473 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 MTIF2P46199 727 aaKnown RBP10.29□□□□□ -0.76
HERC3-204ENST00000422770 FMO5P49326 533 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 ENPEPQ07075 957 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 HTR4Q13639 388 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 PRSS36Q5K4E3 855 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 STXBP5Q5T5C0 1151 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 FAM171BQ6P995 826 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 LIMS2Q7Z4I7 341 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 FAM114A1Q8IWE2 563 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 UBALD2Q8IYN6 164 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 FGF14Q92915 247 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 SLC35C1Q96A29 364 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 FUBP3Q96I24 572 aaKnown RBP eCLIP10.29□□□□□ -0.76
HERC3-204ENST00000422770 PKMYT1Q99640 499 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 ZNF518BQ9C0D4 1074 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 ELOVL4Q9GZR5 314 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 APOBEC3GQ9HC16 384 aaKnown RBP10.29□□□□□ -0.76
HERC3-204ENST00000422770 TRPC7Q9HCX4 862 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 KRT82Q9NSB4 513 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 SAMSN1Q9NSI8 373 aaKnown RBP10.29□□□□□ -0.76
HERC3-204ENST00000422770 FANCLQ9NW38 375 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 TAB2Q9NYJ8 693 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 GDE1Q9NZC3 331 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 CA14Q9ULX7 337 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 NME7Q9Y5B8 376 aa10.29□□□□□ -0.76
HERC3-204ENST00000422770 TMEM221A6NGB7 291 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 SLC38A8A6NNN8 435 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 KCNJ18B7U540 433 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 F8VP50 259 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 M0R296 226 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 TRIM66O15016 1216 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 ABL1P00519 1130 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 AFPP02771 609 aaKnown RBP10.28□□□□□ -0.76
HERC3-204ENST00000422770 ATP1A3P13637 1013 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 MAGEA11P43364 429 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 SIGLEC14Q08ET2 396 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 GRM2Q14416 872 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 KCNJ12Q14500 433 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 CFAP221Q4G0U5 840 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 TRIM67Q6ZTA4 783 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 FAM35AQ86V20 835 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 TMC8Q8IU68 726 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 YAF2Q8IY57 180 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 PPM1KQ8N3J5 372 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 ANKRD20A12PQ8NF67 263 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 ZSCAN18Q8TBC5 510 aaPredicted RBP10.28□□□□□ -0.76
HERC3-204ENST00000422770 MRPS31Q92665 395 aaKnown RBP10.28□□□□□ -0.76
HERC3-204ENST00000422770 TATDN2Q93075 761 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 PBXIP1Q96AQ6 731 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 NT5C1BQ96P26 610 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 ARID3AQ99856 593 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 NT5C1AQ9BXI3 368 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 B3GNT5Q9BYG0 378 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 BCO2Q9BYV7 579 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 THAP9Q9H5L6 903 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 CYP3A43Q9HB55 503 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 ZFP14Q9HCL3 533 aa10.28□□□□□ -0.76
HERC3-204ENST00000422770 AVENQ9NQS1 362 aaPredicted RBP10.28□□□□□ -0.76
HERC3-204ENST00000422770 UXTQ9UBK9 157 aaPredicted RBP10.28□□□□□ -0.76
HERC3-204ENST00000422770 MIA3Q5JRA6 1907 aa10.27□□□□□ -0.76
HERC3-204ENST00000422770 NRG2O14511 850 aaPredicted RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 AP1G2O75843 785 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 FAM163BP0C2L3 166 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 CDK11BP21127 795 aaKnown RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 VIPR2P41587 438 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 MRE11P49959 708 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 EPHA5P54756 1037 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 YWHAEP62258 255 aaKnown RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 KCNH2Q12809 1159 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 FAM78AQ5JUQ0 283 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 CDKAL1Q5VV42 579 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 VSTM1Q6UX27 236 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 DENND5BQ6ZUT9 1274 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 GAREM2Q75VX8 874 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 UNC93AQ86WB7 457 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 SUGP1Q8IWZ8 645 aaKnown RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 SIX5Q8N196 739 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 SLC44A3Q8N4M1 653 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 MAB21L3Q8N8X9 362 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 C12orf29Q8N999 325 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 SLC2A14Q8TDB8 520 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 SMARCD2Q92925 531 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 NXPE3Q969Y0 559 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 SMARCD1Q96GM5 515 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 HEXIM2Q96MH2 286 aaKnown RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 ZSWIM3Q96MP5 696 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 LRFN3Q9BTN0 628 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 RPP25Q9BUL9 199 aaKnown RBP10.27□□□□□ -0.77
HERC3-204ENST00000422770 GPR88Q9GZN0 384 aa10.27□□□□□ -0.77
HERC3-204ENST00000422770 DUSP12Q9UNI6 340 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms