RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 MYO1CO00159 1063 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 BTN3A1O00481 513 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 FRS3O43559 492 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 CTNND1O60716 968 aaKnown RBP5.04□□□□□ -1.6
LINC00397-201ENST00000422074 ERBB2P04626 1255 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 CYP2C18P33260 490 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 PDE6CP51160 858 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 KRTAP1-1Q07627 177 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 HNRNPA0Q13151 305 aaKnown RBP5.04□□□□□ -1.6
LINC00397-201ENST00000422074 CTBP1Q13363 440 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 ZIK1Q3SY52 487 aaPredicted RBP5.04□□□□□ -1.6
LINC00397-201ENST00000422074 LMBRD2Q68DH5 695 aaPredicted RBP5.04□□□□□ -1.6
LINC00397-201ENST00000422074 MTHFD1LQ6UB35 978 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 ZNF783Q6ZMS7 281 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 ZNF280BQ86YH2 543 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 OR6B3Q8NGW1 331 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 IL31RAQ8NI17 732 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 SOCS4Q8WXH5 440 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 THAP7Q9BT49 309 aaPredicted RBP5.04□□□□□ -1.6
LINC00397-201ENST00000422074 FSD1LQ9BXM9 530 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 SEMA4CQ9C0C4 833 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 XPNPEP3Q9NQH7 507 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 PAXBP1Q9Y5B6 917 aa5.04□□□□□ -1.6
LINC00397-201ENST00000422074 hCG_1984214I3L0E3 225 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 KCNA3P22001 575 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 CLCN2P51788 898 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 EEFSECP57772 596 aaKnown RBP5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SSBP2P81877 361 aaPredicted RBP5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SATB1Q01826 763 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SRSF4Q08170 494 aaKnown RBP5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SLC10A2Q12908 348 aaPredicted RBP5.03□□□□□ -1.6
LINC00397-201ENST00000422074 LLGL1Q15334 1064 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 PROSER3Q2NL68 480 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 MGAT5BQ3V5L5 792 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 MINDY4Q4G0A6 757 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SWSAP1Q6NVH7 229 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 PARS2Q7L3T8 475 aaKnown RBP5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SLC29A4Q7RTT9 530 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 C1QL2Q7Z5L3 287 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SLC15A4Q8N697 577 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 GLG1Q92896 1179 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 RSPRY1Q96DX4 576 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 SUCLG2Q96I99 432 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 C1QTNF7Q9BXJ2 289 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 B3GNT5Q9BYG0 378 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 CXorf36Q9H7Y0 433 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 GLOD4Q9HC38 313 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 C1orf112Q9NSG2 853 aa5.03□□□□□ -1.6
LINC00397-201ENST00000422074 MRPS17Q9Y2R5 130 aaKnown RBP5.03□□□□□ -1.6
LINC00397-201ENST00000422074 DNAJC9-AS1A6NH13 148 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 FAM227AF5H4B4 570 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 PRPF3O43395 683 aaKnown RBP5.02□□□□□ -1.61
LINC00397-201ENST00000422074 FESP07332 822 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 SLC44A4Q53GD3 710 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 COL23A1Q86Y22 540 aaPredicted RBP5.02□□□□□ -1.61
LINC00397-201ENST00000422074 CHPFQ8IZ52 775 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 ABRAQ8N0Z2 381 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 MAGEB6Q8N7X4 407 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 MAML1Q92585 1016 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 C22orf23Q9BZE7 217 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 ZNF518BQ9C0D4 1074 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 EID1Q9Y6B2 187 aa5.02□□□□□ -1.61
LINC00397-201ENST00000422074 CAPN8A6NHC0 703 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 ISM1B1AKI9 464 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 QSOX1O00391 747 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 SCGB1D2O95969 90 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 HRGP04196 525 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 KITP10721 976 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 SLC13A2Q13183 592 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 RAB32Q13637 225 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 TBC1D25Q3MII6 688 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 ZNF782Q6ZMW2 699 aaPredicted RBP5.01□□□□□ -1.61
LINC00397-201ENST00000422074 Q6ZWC4 215 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 MICU3Q86XE3 530 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 SLC15A3Q8IY34 581 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 FANCBQ8NB91 859 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 OSCP1Q8WVF1 389 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 ADAMTS5Q9UNA0 930 aa5.01□□□□□ -1.61
LINC00397-201ENST00000422074 TISP43B9A030 160 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 ADAMTS3O15072 1205 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 TBX3O15119 743 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 TBC1D4O60343 1298 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 PRKCBP05771 671 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 DLDP09622 509 aaKnown RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 NHLRC4P0CG21 123 aaPredicted RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 TUBA4AP68366 448 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 HOXA4Q00056 320 aaPredicted RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 PPP2R5AQ15172 486 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 LRRC41Q15345 812 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 PLA1AQ53H76 456 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 APOA5Q6Q788 366 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 NMD3Q96D46 503 aaKnown RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 R3HDM4Q96D70 268 aa5□□□□□ -1.61
LINC00397-201ENST00000422074 MS4A7Q9GZW8 240 aaPredicted RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 A1CFQ9NQ94 594 aaKnown RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 TRMT13Q9NUP7 481 aaKnown RBP5□□□□□ -1.61
LINC00397-201ENST00000422074 USP19O94966 1318 aa4.99□□□□□ -1.61
LINC00397-201ENST00000422074 TRIM43BA6NCK2 446 aa4.99□□□□□ -1.61
LINC00397-201ENST00000422074 H7C1Q1 480 aa4.99□□□□□ -1.61
LINC00397-201ENST00000422074 S100BP04271 92 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms