RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 AP1G2O75843 785 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 HAPLN1P10915 354 aaPredicted RBP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 GRIK1P39086 918 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 TBX2Q13207 712 aaPredicted RBP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 CNGA2Q16280 664 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 GOLGA7BQ2TAP0 167 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 LCLAT1Q6UWP7 414 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 TMEM184AQ6ZMB5 413 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 RTL10Q7L3V2 364 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 CNGA4Q8IV77 575 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 DMAP1Q9NPF5 467 aaPredicted RBP18.59■□□□□ 0.57
LINC00271-201ENST00000421378 AIPL1Q9NZN9 384 aa18.59■□□□□ 0.57
LINC00271-201ENST00000421378 TRIM66O15016 1216 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 MFAP3LO75121 409 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 SOAT2O75908 522 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 NPR3P17342 541 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 ALDH1A3P47895 512 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 BCAT1P54687 386 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 SLC8A3P57103 927 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 CCDC85BQ15834 202 aaPredicted RBP18.58■□□□□ 0.56
LINC00271-201ENST00000421378 ASIC2Q16515 512 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 PPM1LQ5SGD2 360 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 E4F1Q66K89 784 aaPredicted RBP18.58■□□□□ 0.56
LINC00271-201ENST00000421378 NOP9Q86U38 636 aaKnown RBP18.58■□□□□ 0.56
LINC00271-201ENST00000421378 SCN4BQ8IWT1 228 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 ANKRD52Q8NB46 1076 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 SYN2Q92777 582 aaPredicted RBP18.58■□□□□ 0.56
LINC00271-201ENST00000421378 DZANK1Q9NVP4 752 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 CLDND1Q9NY35 253 aa18.58■□□□□ 0.56
LINC00271-201ENST00000421378 F8VP50 259 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 M0QYV0 167 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 ZMYND10O75800 440 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 MICAL2O94851 1124 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 LRG1P02750 347 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 CACNA2D1P54289 1103 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 RPL10AP62906 217 aaKnown RBP18.57■□□□□ 0.56
LINC00271-201ENST00000421378 TWF1Q12792 350 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 PLD1Q13393 1074 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 ADAM15Q13444 863 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 COL19A1Q14993 1142 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 CTC1Q2NKJ3 1217 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 EP400NLQ6ZTU2 488 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 CLEC20AQ6ZU45 233 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 IRF2BP2Q7Z5L9 587 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 TTC30AQ86WT1 665 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 ZNF677Q86XU0 584 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 PABPC5Q96DU9 382 aaKnown RBP18.57■□□□□ 0.56
LINC00271-201ENST00000421378 DUSP16Q9BY84 665 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 SFXN1Q9H9B4 322 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 CSNK1G1Q9HCP0 422 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 TMEM30AQ9NV96 361 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 ZDHHC7Q9NXF8 308 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 NOCTQ9UK39 431 aaKnown RBP18.57■□□□□ 0.56
LINC00271-201ENST00000421378 PRUNE2Q8WUY3 3088 aa18.57■□□□□ 0.56
LINC00271-201ENST00000421378 MYH10P35580 1976 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 AKR1B15C9JRZ8 316 aaPredicted RBP18.56■□□□□ 0.56
LINC00271-201ENST00000421378 RFPL2O75678 378 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 ATF6P18850 670 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 ANXA13P27216 316 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 HOXA9P31269 272 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 SSTR3P32745 418 aaPredicted RBP18.56■□□□□ 0.56
LINC00271-201ENST00000421378 ADKP55263 362 aaKnown RBP18.56■□□□□ 0.56
LINC00271-201ENST00000421378 MAP3K7CLP57077 242 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 BST2Q10589 180 aaKnown RBP18.56■□□□□ 0.56
LINC00271-201ENST00000421378 MEA1Q16626 185 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 DDR2Q16832 855 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 TAF3Q5VWG9 929 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 OR8K1Q8NGG5 319 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 DDX1Q92499 740 aaKnown RBP18.56■□□□□ 0.56
LINC00271-201ENST00000421378 KCNK16Q96T55 309 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 DNAJC7Q99615 494 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 SMOQ99835 787 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 ABHD10Q9NUJ1 306 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 PCDHGC3Q9UN70 934 aa18.56■□□□□ 0.56
LINC00271-201ENST00000421378 TBX10O75333 385 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 BEST1O76090 585 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 HNRNPA1P09651 372 aaKnown RBP eCLIP18.55■□□□□ 0.56
LINC00271-201ENST00000421378 SETSIPP0DME0 302 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 GPR15P49685 360 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 CDR2Q01850 454 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 KLHL30Q0D2K2 578 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 VEPH1Q14D04 833 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 SKIV2LQ15477 1246 aaKnown RBP18.55■□□□□ 0.56
LINC00271-201ENST00000421378 TSR1Q2NL82 804 aaKnown RBP18.55■□□□□ 0.56
LINC00271-201ENST00000421378 SPC24Q8NBT2 197 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 UBA3Q8TBC4 463 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 SLC20A1Q8WUM9 679 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 PPM1EQ8WY54 764 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 ANP32BQ92688 251 aaKnown RBP18.55■□□□□ 0.56
LINC00271-201ENST00000421378 C8orf48Q96LL4 319 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 PDCL3Q9H2J4 239 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 IMPACTQ9P2X3 320 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 GOLGA6L6A8MZA4 724 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 MMEP08473 750 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 CFHP08603 1231 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 HOXB8P17481 243 aaPredicted RBP18.55■□□□□ 0.56
LINC00271-201ENST00000421378 HNRNPH3P31942 346 aaKnown RBP18.55■□□□□ 0.56
LINC00271-201ENST00000421378 PRKCIP41743 596 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 EPHB3P54753 998 aa18.55■□□□□ 0.56
LINC00271-201ENST00000421378 PDE4CQ08493 712 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms