RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 HERPUD2Q9BSE4 406 aa5.53□□□□□ -1.52
VPS8-202ENST00000421069 UNKLQ9H9P5 680 aaKnown RBP5.53□□□□□ -1.52
VPS8-202ENST00000421069 SLC39A10Q9ULF5 831 aa5.53□□□□□ -1.52
VPS8-202ENST00000421069 FZD1Q9UP38 647 aa5.53□□□□□ -1.52
VPS8-202ENST00000421069 TBC1D30Q9Y2I9 924 aa5.53□□□□□ -1.52
VPS8-202ENST00000421069 A0A087WZ62 844 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 KRTAP9-6A0A140TA67 174 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 RRP9O43818 475 aaKnown RBP5.52□□□□□ -1.53
VPS8-202ENST00000421069 NR4A1P22736 598 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 ZFP36P26651 326 aaKnown RBP5.52□□□□□ -1.53
VPS8-202ENST00000421069 CD6P30203 668 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 PUM3Q15397 648 aaKnown RBP5.52□□□□□ -1.53
VPS8-202ENST00000421069 SPATS1Q496A3 300 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 NRN1LQ496H8 165 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 SPDYAQ5MJ70 313 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 RBM20Q5T481 1227 aaKnown RBP5.52□□□□□ -1.53
VPS8-202ENST00000421069 ICE2Q659A1 982 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 FBXO38Q6PIJ6 1188 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 PPP2R3CQ969Q6 453 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 LENG9Q96B70 501 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 ADAM2Q99965 735 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 TRIM5Q9C035 493 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 RGL1Q9NZL6 768 aa5.52□□□□□ -1.53
VPS8-202ENST00000421069 NDRG4Q9ULP0 352 aaKnown RBP5.52□□□□□ -1.53
VPS8-202ENST00000421069 MAGED2Q9UNF1 606 aaPredicted RBP5.52□□□□□ -1.53
VPS8-202ENST00000421069 TRGV11A0A075B6L2 103 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 hCG_1642624A0A1W2PR95 340 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 FAM234BA2RU67 622 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 PODXLO00592 558 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 SKAP2O75563 359 aaPredicted RBP5.51□□□□□ -1.53
VPS8-202ENST00000421069 GATA3P23771 443 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 GRM1Q13255 1194 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 BLMHQ13867 455 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 TRIM14Q14142 442 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 TIGD2Q4W5G0 525 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 INO80DQ53TQ3 878 aaPredicted RBP5.51□□□□□ -1.53
VPS8-202ENST00000421069 ARHGAP40Q5TG30 622 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 CACHD1Q5VU97 1274 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 ARL6IP4Q66PJ3 421 aaKnown RBP5.51□□□□□ -1.53
VPS8-202ENST00000421069 MZT2AQ6P582 158 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 KIAA0408Q6ZU52 694 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 ARHGEF19Q8IW93 802 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.51□□□□□ -1.53
VPS8-202ENST00000421069 GLIS1Q8NBF1 620 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 CACTINQ8WUQ7 758 aaKnown RBP5.51□□□□□ -1.53
VPS8-202ENST00000421069 MUL1Q969V5 352 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 ZNF668Q96K58 619 aaPredicted RBP5.51□□□□□ -1.53
VPS8-202ENST00000421069 AMBRA1Q9C0C7 1298 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 CXorf36Q9H7Y0 433 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 PPCSQ9HAB8 311 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 ZBTB26Q9HCK0 441 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 TMEM8AQ9HCN3 771 aa5.51□□□□□ -1.53
VPS8-202ENST00000421069 C1QTNF3-AMACRE9PGA6 284 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 hCG_1984214I3L0E3 225 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 PIAS2O75928 621 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 SPDEFO95238 335 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 RASAL1O95294 804 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 NDST3O95803 873 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 SRGNP10124 158 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 PTGS2P35354 604 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 PRKAG1P54619 331 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 GUCY1B3Q02153 619 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 RAB30Q15771 203 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 MAPKAPK3Q16644 382 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 CCDC38Q502W7 563 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 ANO1Q5XXA6 986 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 RGS7BPQ6MZT1 257 aaPredicted RBP5.5□□□□□ -1.53
VPS8-202ENST00000421069 TLDC1Q6P9B6 456 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 RHOUQ7L0Q8 258 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 KCTD20Q7Z5Y7 419 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 SLC15A3Q8IY34 581 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 SPARTQ8N0X7 666 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 SYNE4Q8N205 404 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 NKAPQ8N5F7 415 aaKnown RBP5.5□□□□□ -1.53
VPS8-202ENST00000421069 FAM136AQ96C01 138 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 FAM227BQ96M60 508 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 SSX2IPQ9Y2D8 614 aa5.5□□□□□ -1.53
VPS8-202ENST00000421069 MRPS17Q9Y2R5 130 aaKnown RBP5.5□□□□□ -1.53
VPS8-202ENST00000421069 CD3EAPO15446 510 aaKnown RBP5.49□□□□□ -1.53
VPS8-202ENST00000421069 RGS10O43665 173 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 CSTBP04080 98 aaKnown RBP5.49□□□□□ -1.53
VPS8-202ENST00000421069 CSF1RP07333 972 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 C1SP09871 688 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 EGR1P18146 543 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 PDIA3P30101 505 aaKnown RBP5.49□□□□□ -1.53
VPS8-202ENST00000421069 SLC5A2P31639 672 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 HALP42357 657 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 GRK6P43250 576 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 PDE6CP51160 858 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 SCAPQ12770 1279 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 CCNIQ14094 377 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 PTK2BQ14289 1009 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 TUBB8Q3ZCM7 444 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 ZACNQ401N2 412 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.49□□□□□ -1.53
VPS8-202ENST00000421069 CERCAMQ5T4B2 595 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 VPS53Q5VIR6 699 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 MRNIPQ6NTE8 343 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 CCDC174Q6PII3 467 aa5.49□□□□□ -1.53
VPS8-202ENST00000421069 CRTC1Q6UUV9 634 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms