RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 USP17L7P0C7H9 530 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 CSRP1P21291 193 aaKnown RBP15.29■□□□□ 0.04
NFE4-201ENST00000420058 POLR2BP30876 1174 aaKnown RBP15.29■□□□□ 0.04
NFE4-201ENST00000420058 DDIT3P35638 169 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 UBA7P41226 1012 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 RPL10AP62906 217 aaKnown RBP15.29■□□□□ 0.04
NFE4-201ENST00000420058 ZNF252P-AS1Q0IIN9 211 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 FOXC1Q12948 553 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 CFAP221Q4G0U5 840 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 FAM171BQ6P995 826 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 TMEM92Q6UXU6 159 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 USP49Q70CQ1 688 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 NT5DC4Q86YG4 428 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 GATA6Q92908 595 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 ATP2A3Q93084 1043 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 ACDQ96AP0 544 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 CALML4Q96GE6 196 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 TPSD1Q9BZJ3 242 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 TRPC7Q9HCX4 862 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 GDAP2Q9NXN4 497 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 UXTQ9UBK9 157 aaPredicted RBP15.29■□□□□ 0.04
NFE4-201ENST00000420058 SIX4Q9UIU6 781 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 AGAP1Q9UPQ3 857 aa15.29■□□□□ 0.04
NFE4-201ENST00000420058 PI4KAP42356 2102 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 PTPRDP23468 1912 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 TCHHQ07283 1943 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 TRAV19A0A0A6YYK7 116 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 ATP2C2O75185 946 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 IL18RAPO95256 599 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 ITGB3P05106 788 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 CEACAM1P13688 526 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 GBP1P32455 592 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 PNPLA4P41247 253 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 IFNAR2P48551 515 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 PSMD2Q13200 908 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 SOWAHAQ2M3V2 549 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 USP39Q53GS9 565 aaKnown RBP15.28■□□□□ 0.04
NFE4-201ENST00000420058 C2orf27AQ580R0 203 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 DAB2IPQ5VWQ8 1189 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 FRMD1Q8N878 549 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 MDGA1Q8NFP4 955 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 TSTD1Q8NFU3 115 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 POMGNT1Q8WZA1 660 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 CNOT6LQ96LI5 555 aaKnown RBP15.28■□□□□ 0.04
NFE4-201ENST00000420058 ARHGAP26Q9UNA1 814 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 KIAA1549LQ6ZVL6 1849 aa15.28■□□□□ 0.04
NFE4-201ENST00000420058 KHNYNO15037 678 aaKnown RBP15.27■□□□□ 0.04
NFE4-201ENST00000420058 KRT18P05783 430 aaKnown RBP15.27■□□□□ 0.04
NFE4-201ENST00000420058 CKMP06732 381 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 HDCP19113 662 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 LMO2P25791 158 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 ABCD1P33897 745 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 SEC13P55735 322 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 USP46P62068 366 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 TFAMQ00059 246 aaKnown RBP15.27■□□□□ 0.04
NFE4-201ENST00000420058 CRY1Q16526 586 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 ANO7Q6IWH7 933 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 SFR1Q86XK3 245 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 BRSK2Q8IWQ3 736 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 ADGRG2Q8IZP9 1017 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 TMEM86AQ8N2M4 240 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 CCDC33Q8N5R6 958 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 TTC16Q8NEE8 873 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 LARP4BQ92615 738 aaKnown RBP15.27■□□□□ 0.04
NFE4-201ENST00000420058 DNAJC19Q96DA6 116 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 ZNF560Q96MR9 790 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 FNBP1Q96RU3 617 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 FAM213AQ9BRX8 229 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 RNF38Q9H0F5 515 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 TMEM9BQ9NQ34 198 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 TMEM74BQ9NUR3 256 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 MMP17Q9ULZ9 603 aa15.27■□□□□ 0.04
NFE4-201ENST00000420058 MYO18AQ92614 2054 aaKnown RBP15.27■□□□□ 0.03
NFE4-201ENST00000420058 CELSR3Q9NYQ7 3312 aa15.27■□□□□ 0.03
NFE4-201ENST00000420058 LOC400499M0QZD8 3231 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 A0A0A0MRY4 1105 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 EIF5BO60841 1220 aaKnown RBP15.26■□□□□ 0.03
NFE4-201ENST00000420058 HUS1O60921 280 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 TBCAO75347 108 aaKnown RBP15.26■□□□□ 0.03
NFE4-201ENST00000420058 MAGEA11P43364 429 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 SLC6A11P48066 632 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 POSTNQ15063 836 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 EMC10Q5UCC4 262 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 CSGALNACT2Q8N6G5 542 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 TOP6BLQ8N6T0 577 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 LRRC52Q8N7C0 313 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 KBTBD7Q8WVZ9 684 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 RLN3Q8WXF3 142 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 EXOC4Q96A65 974 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 SAAL1Q96ER3 474 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 FUBP3Q96I24 572 aaKnown RBP eCLIP15.26■□□□□ 0.03
NFE4-201ENST00000420058 EPSTI1Q96J88 318 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 SCNM1Q9BWG6 230 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 ADAM33Q9BZ11 813 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 CRTAC1Q9NQ79 661 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 MBD1Q9UIS9 605 aaPredicted RBP15.26■□□□□ 0.03
NFE4-201ENST00000420058 SNX9Q9Y5X1 595 aa15.26■□□□□ 0.03
NFE4-201ENST00000420058 MYOFQ9NZM1 2061 aa15.25■□□□□ 0.03
NFE4-201ENST00000420058 MYMKA6NI61 221 aa15.25■□□□□ 0.03
NFE4-201ENST00000420058 LEFTY2O00292 366 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms