RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 C1QTNF3Q9BXJ4 246 aa6.46□□□□□ -1.38
VPS45-203ENST00000419023 HECAQ9UBI9 543 aaPredicted RBP6.46□□□□□ -1.38
VPS45-203ENST00000419023 ZNF112Q9UJU3 913 aa6.46□□□□□ -1.38
VPS45-203ENST00000419023 MFAP3LO75121 409 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 IFIT1P09914 478 aaKnown RBP6.45□□□□□ -1.38
VPS45-203ENST00000419023 GNAT2P19087 354 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 CRHR1P34998 444 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 PTPN7P35236 360 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 GCLCP48506 637 aaPredicted RBP6.45□□□□□ -1.38
VPS45-203ENST00000419023 EPHB1P54762 984 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 MGAT2Q10469 447 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 SEPT2Q15019 361 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 CDSNQ15517 529 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 FAM110CQ1W6H9 321 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 TWISTNBQ3B726 338 aaPredicted RBP6.45□□□□□ -1.38
VPS45-203ENST00000419023 METTL24Q5JXM2 366 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 PRAMEF14Q5SWL7 426 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 ZBTB46Q86UZ6 589 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 XYLT1Q86Y38 959 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 SCYL3Q8IZE3 742 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 ANKRD35Q8N283 1001 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 PQLC1Q8N2U9 271 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 MB21D1Q8N884 522 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 OR7D4Q8NG98 312 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 HOXB13Q92826 284 aaPredicted RBP6.45□□□□□ -1.38
VPS45-203ENST00000419023 MIEF2Q96C03 454 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 BORCS6Q96GS4 357 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 C8orf48Q96LL4 319 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 CDK5RAP1Q96SZ6 601 aaKnown RBP6.45□□□□□ -1.38
VPS45-203ENST00000419023 BCO1Q9HAY6 547 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 INTUQ9ULD6 942 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 SPEF2Q9C093 1822 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 MROH5Q6ZUA9 1318 aa6.45□□□□□ -1.38
VPS45-203ENST00000419023 MYBBP1AQ9BQG0 1328 aaKnown RBP6.45□□□□□ -1.38
VPS45-203ENST00000419023 MYH3P11055 1940 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 RPAP1Q9BWH6 1393 aaPredicted RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 APAF1O14727 1248 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 ALDH1L1O75891 902 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 SNUPNO95149 360 aaKnown RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 ADRB1P08588 477 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 FOSL2P15408 326 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 SREBF1P36956 1147 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 NEK2P51955 445 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 BIRC2Q13490 618 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 PPP2R5AQ15172 486 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 APBB1IPQ7Z5R6 666 aaPredicted RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 GSPT2Q8IYD1 628 aaKnown RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 TRMT2AQ8IZ69 625 aaKnown RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 ST8SIA2Q92186 375 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 CHMP4CQ96CF2 233 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 FAM122AQ96E09 287 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 CEP95Q96GE4 821 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 CPPED1Q9BRF8 314 aaPredicted RBP6.44□□□□□ -1.38
VPS45-203ENST00000419023 LDAHQ9H6V9 325 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 AGTPBP1Q9UPW5 1226 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 TSC22D4Q9Y3Q8 395 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 OTOFQ9HC10 1997 aa6.44□□□□□ -1.38
VPS45-203ENST00000419023 CTNND1O60716 968 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 EIF3JO75822 258 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 IPO13O94829 963 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 ENDOD1O94919 500 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 HK1P19367 917 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 RECQLP46063 649 aaPredicted RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 SPDYAQ5MJ70 313 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 GJC2Q5T442 439 aaPredicted RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 APOBEC3HQ6NTF7 200 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 PPP4R4Q6NUP7 873 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 Q6ZRM9 215 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 TSPYL6Q8N831 410 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 MDGA1Q8NFP4 955 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 ATXN2LQ8WWM7 1075 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 STON2Q8WXE9 905 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 SOCS4Q8WXH5 440 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 PGBD4Q96DM1 585 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 GUCD1Q96NT3 240 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 CDX2Q99626 313 aaPredicted RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 GPR20Q99678 358 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 LSM14BQ9BX40 385 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 AASDHPPTQ9NRN7 309 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 GNL3LQ9NVN8 582 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 SAP30BPQ9UHR5 308 aaKnown RBP6.43□□□□□ -1.38
VPS45-203ENST00000419023 OGDHLQ9ULD0 1010 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 HDAC5Q9UQL6 1122 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 SIK3Q9Y2K2 1263 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 GIT1Q9Y2X7 761 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 TESMINQ9Y4I5 508 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 AFG3L2Q9Y4W6 797 aa6.43□□□□□ -1.38
VPS45-203ENST00000419023 ZSWIM8A7E2V4 1837 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 FAM171A2A8MVW0 826 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 GRM8O00222 908 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 ENTPD3O75355 529 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 KRT18P05783 430 aaKnown RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 SLC5A1P13866 664 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 ZKSCAN1P17029 563 aaPredicted RBP6.42□□□□□ -1.38
VPS45-203ENST00000419023 CYP2B6P20813 491 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 SLC6A9P48067 706 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 SLC16A1P53985 500 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 KRTAP10-2P60368 255 aa6.42□□□□□ -1.38
VPS45-203ENST00000419023 IRX3P78415 501 aaPredicted RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms