RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 PLA2G5P39877 138 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 IL15P40933 162 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 RFX5P48382 616 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 MTNR1BP49286 362 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 IFIT5Q13325 482 aaKnown RBP4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 BECN1Q14457 450 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 UBXN2BQ14CS0 331 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 SEPT2Q15019 361 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 METRNLQ641Q3 311 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 DPY19L2P1Q6NXN4 242 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 PTF1AQ7RTS3 328 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 ZNF34Q8IZ26 560 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 ASB10Q8WXI3 467 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 DPF2Q92785 391 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 HOXB13Q92826 284 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 MYOCQ99972 504 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 FAM126AQ9BYI3 521 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 C22orf23Q9BZE7 217 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 NYXQ9GZU5 481 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 RNPEPQ9H4A4 650 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 CNNM1Q9NRU3 951 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 DIAPH3Q9NSV4 1193 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 ECHDC1Q9NTX5 307 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 STAP2Q9UGK3 403 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 NARFQ9UHQ1 456 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 MCM8Q9UJA3 840 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 PRKAB1Q9Y478 270 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 DOCK2Q92608 1830 aa4.5□□□□□ -1.69
HMGB3P20-201ENST00000417997 TAF1P21675 1872 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 USP42Q9H9J4 1324 aaKnown RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 A0A1B0GTW7 788 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 PIPSLA2A3N6 862 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 KIAA0355O15063 1070 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 KIAA0391O15091 583 aaKnown RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 TEX33O43247 280 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 ERN1O75460 977 aaKnown RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CIAO1O76071 339 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 NTSR2O95665 410 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 MAP4K4O95819 1239 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 PCSK1P29120 753 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 GUCY1A2P33402 732 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 IGHMBP2P38935 993 aaKnown RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 HSD11B2P80365 405 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CREMQ03060 361 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 MGAT2Q10469 447 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 TFCP2Q12800 502 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 KLF1Q13351 362 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 ACAP2Q15057 778 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CCDC152Q4G0S7 254 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 GORABQ5T7V8 394 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 STRIP1Q5VSL9 837 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 ABHD17BQ5VST6 288 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 SUSD4Q5VX71 490 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 PGM2L1Q6PCE3 622 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 FOXR2Q6PJQ5 311 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 OLFML1Q6UWY5 402 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CLEC4GQ6UXB4 293 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 HSCBQ8IWL3 235 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 RHOT1Q8IXI2 618 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 TMEM132CQ8N3T6 1108 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 FBXO41Q8TF61 875 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 RUFY2Q8WXA3 655 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 NEUROD6Q96NK8 337 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 MPHOSPH8Q99549 860 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 C7orf25Q9BPX7 421 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 FSD1Q9BTV5 496 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CCDC8Q9H0W5 538 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 FBXO34Q9NWN3 711 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 USP25Q9UHP3 1055 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 INTUQ9ULD6 942 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 SIK3Q9Y2K2 1263 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 MTO1Q9Y2Z2 717 aaKnown RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 RFX7Q2KHR2 1363 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CARMIL3Q8ND23 1372 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 ABCC12Q96J65 1359 aa4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 POLR2AP24928 1970 aaKnown RBP4.49□□□□□ -1.69
HMGB3P20-201ENST00000417997 CCDC88AQ3V6T2 1871 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 ANKRD31Q8N7Z5 1873 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 A0A1B0GUL7 405 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 TCRBV7S2A1N4TA0A589 114 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 MARCH11A6NNE9 402 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 ZAR1LA6NP61 321 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 HIP1O00291 1037 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 GPANK1O95872 356 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 AGXTP21549 392 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 FGFR4P22455 802 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 SLC6A9P48067 706 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 SEC24CP53992 1094 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 ERVK-21P61565 698 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 OCA2Q04671 838 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 TXNRD1Q16881 649 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 LRRC24Q50LG9 513 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 CCDC158Q5M9N0 1113 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 TTC39AQ5SRH9 613 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 TBC1D9BQ66K14 1250 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 ARMC6Q6NXE6 501 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 LDHAL6AQ6ZMR3 332 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 ZNF575Q86XF7 245 aa4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 NBPF5PQ86XG9 351 aaPredicted RBP4.48□□□□□ -1.69
HMGB3P20-201ENST00000417997 CNTD1Q8N815 330 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms