RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 SLC4A1P02730 911 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 CACNB2Q08289 660 aaPredicted RBP13.38□□□□□ -0.27
SCAF8-203ENST00000417268 GPS1Q13098 491 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 FBXO47Q5MNV8 452 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 DEFB128Q7Z7B8 93 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 JAMLQ86YT9 394 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 UBA3Q8TBC4 463 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 DEPDC1BQ8WUY9 529 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 INTS13Q9NVM9 706 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 BTBD7Q9P203 1132 aa13.38□□□□□ -0.27
SCAF8-203ENST00000417268 EIF4BP23588 611 aaKnown RBP13.37□□□□□ -0.27
SCAF8-203ENST00000417268 LCA5Q86VQ0 697 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 BRSK2Q8IWQ3 736 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 TMBIM4Q9HC24 238 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 PAIP2BQ9ULR5 123 aaKnown RBP13.37□□□□□ -0.27
SCAF8-203ENST00000417268 KRT38O76015 456 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 LYPLA2O95372 231 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 HSPA4LO95757 839 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 SERPINB3P29508 390 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 MYL6P60660 151 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 IL1RL1Q01638 556 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 TMEM259Q4ZIN3 620 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 RCOR2Q8IZ40 523 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ABRAQ8N0Z2 381 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 C9orf72Q96LT7 481 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 DNAJC7Q99615 494 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ERP44Q9BS26 406 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ZFATQ9P243 1243 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 CRYBG1Q9Y4K1 1723 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 CYBBP04839 570 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ALDH2P05091 517 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 TPI1P60174 286 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ITGB3BPQ13352 177 aaPredicted RBP13.37□□□□□ -0.27
SCAF8-203ENST00000417268 PCBP1Q15365 356 aaKnown RBP eCLIP13.37□□□□□ -0.27
SCAF8-203ENST00000417268 EPC2Q52LR7 807 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ITPRIPL1Q6GPH6 555 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 HIC2Q96JB3 615 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 ABI2Q9NYB9 513 aaPredicted RBP13.37□□□□□ -0.27
SCAF8-203ENST00000417268 SENP1Q9P0U3 644 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 TLK1Q9UKI8 766 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 FAM47DPA6NHR8 397 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 SMIM10L2AP0DMW4 78 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 SMIM10L2BP0DMW5 78 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 LHX1P48742 406 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 DPF3Q92784 378 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 SP110Q9HB58 689 aa13.37□□□□□ -0.27
SCAF8-203ENST00000417268 F8W8V4 182 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PHF2O75151 1096 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 ATP6V1G2O95670 118 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 ENO1P06733 434 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PCYT1AP49585 367 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 FSCBQ5H9T9 825 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 ADGRF2Q8IZF7 708 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 C4orf33Q8N1A6 199 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PPM1NQ8N819 430 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 SKA2Q8WVK7 121 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 HAUS8Q9BT25 410 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 FSD1LQ9BXM9 530 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 HMGCRP04035 888 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PPARGP37231 505 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PMS1P54277 932 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 ROR1Q01973 937 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PAN2Q504Q3 1202 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 CCDC92Q53HC0 331 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 SPOPLQ6IQ16 392 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PPTC7Q8NI37 304 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 DDX20Q9UHI6 824 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 NID2Q14112 1375 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 APOL1O14791 398 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 GLRA2P23416 452 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 HIC1Q14526 733 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 NFE2Q16621 373 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 AMHR2Q16671 573 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 GJC2Q5T442 439 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 ACAD10Q6JQN1 1059 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 NUDT18Q6ZVK8 323 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 ACOT1Q86TX2 421 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 NUDCD3Q8IVD9 361 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 SPDYE1Q8NFV5 336 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 KDM4CQ9H3R0 1056 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 TRPC7Q9HCX4 862 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 PAPOLBQ9NRJ5 636 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 KCND1Q9NSA2 647 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 LMCD1Q9NZU5 365 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 NAGPAQ9UK23 515 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 FARP1Q9Y4F1 1045 aaPredicted RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 SNUPNO95149 360 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 VHLP40337 213 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 RAD51Q06609 339 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 SH3D19Q5HYK7 790 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
SCAF8-203ENST00000417268 FEZF2Q8TBJ5 459 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 TMEM117Q9H0C3 514 aa13.36□□□□□ -0.27
SCAF8-203ENST00000417268 BAG5Q9UL15 447 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms