RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 TECTAO75443 2155 aa19.15■□□□□ 0.66
SEMA3B-201ENST00000416295 SLC38A8A6NNN8 435 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 GJA1P17302 382 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 ORC1Q13415 861 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 CUL2Q13617 745 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 TEAD2Q15562 447 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 GAREM2Q75VX8 874 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 FAM35AQ86V20 835 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 IRF2BP1Q8IU81 584 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 RSAD2Q8WXG1 361 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 MYRFLQ96LU7 910 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 CISHQ9NSE2 258 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 ZMYM5Q9UJ78 669 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 MAGED2Q9UNF1 606 aaPredicted RBP19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 TRIOO75962 3097 aa19.14■□□□□ 0.65
SEMA3B-201ENST00000416295 DOCK8Q8NF50 2099 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 TMEM221A6NGB7 291 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 M0R296 226 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 CLDN5O00501 218 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 MTIF2P46199 727 aaKnown RBP19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 SIGLEC14Q08ET2 396 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 PARM1Q6UWI2 310 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 FUKQ8N0W3 1084 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 SLC44A3Q8N4M1 653 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 FGF14Q92915 247 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 ASB16Q96NS5 453 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 TWNKQ96RR1 684 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 ARID3AQ99856 593 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 IL21Q9HBE4 155 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 DMAP1Q9NPF5 467 aaPredicted RBP19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 TMEM63CQ9P1W3 806 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 DUSP12Q9UNI6 340 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 DOCK6Q96HP0 2047 aa19.13■□□□□ 0.65
SEMA3B-201ENST00000416295 F8VP50 259 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 ECI2O75521 394 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 CCDC130P13994 396 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 LRMPQ12912 555 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 FAM78AQ5JUQ0 283 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 DENND5BQ6ZUT9 1274 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 C12orf29Q8N999 325 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 EHBP1Q8NDI1 1231 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 STKLD1Q8NE28 680 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 LMO3Q8TAP4 145 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 ENOX1Q8TC92 643 aaKnown RBP19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 SLC2A14Q8TDB8 520 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 WHAMMQ8TF30 809 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 SMARCD2Q92925 531 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 KRT82Q9NSB4 513 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 FAM49BQ9NUQ9 324 aa19.12■□□□□ 0.65
SEMA3B-201ENST00000416295 ZNF318Q5VUA4 2279 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 NRG2O14511 850 aaPredicted RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 AP1G2O75843 785 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 DDX6P26196 483 aaKnown RBP eCLIP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 MAN2A1Q16706 1144 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 ZNF394Q53GI3 561 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 GPR158Q5T848 1215 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 CAVIN1Q6NZI2 390 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 PAQR9Q6ZVX9 377 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 SUGP1Q8IWZ8 645 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 PPM1KQ8N3J5 372 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 ZSCAN18Q8TBC5 510 aaPredicted RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 MRPS31Q92665 395 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 PBXIP1Q96AQ6 731 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 ELSPBP1Q96BH3 223 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 CYFIP2Q96F07 1278 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 TMEM176AQ96HP8 235 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 ZSWIM3Q96MP5 696 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 HNRNPABQ99729 332 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 KXD1Q9BQD3 176 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 INTS2Q9H0H0 1204 aaKnown RBP19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 TASP1Q9H6P5 420 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 TRPV4Q9HBA0 871 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 ZFP14Q9HCL3 533 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 GCNT4Q9P109 453 aa19.11■□□□□ 0.65
SEMA3B-201ENST00000416295 GTPBP10A4D1E9 387 aaKnown RBP19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 SOBPA7XYQ1 873 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 F11P03951 625 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 FAM200BP0CF97 657 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 SRFP11831 508 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 PRKCSHP14314 528 aaPredicted RBP19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 CACNA2D1P54289 1103 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 RAD23BP54727 409 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 CYP4F8P98187 520 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 GCNT1Q02742 428 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 KLHL40Q2TBA0 621 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 POTEHQ6S545 545 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 TMEM150AQ86TG1 271 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 E2F7Q96AV8 911 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 HEXIM2Q96MH2 286 aaKnown RBP19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 TTLL2Q9BWV7 592 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 SMOC2Q9H3U7 446 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 TMEM30AQ9NV96 361 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 NFE2L3Q9Y4A8 694 aa19.1■□□□□ 0.65
SEMA3B-201ENST00000416295 KCNJ18B7U540 433 aa19.09■□□□□ 0.65
SEMA3B-201ENST00000416295 RTN3O95197 1032 aaPredicted RBP19.09■□□□□ 0.65
SEMA3B-201ENST00000416295 FCARP24071 287 aa19.09■□□□□ 0.65
SEMA3B-201ENST00000416295 EEF1GP26641 437 aaKnown RBP19.09■□□□□ 0.65
SEMA3B-201ENST00000416295 ADORA2BP29275 332 aa19.09■□□□□ 0.65
SEMA3B-201ENST00000416295 KCNJ12Q14500 433 aa19.09■□□□□ 0.65
SEMA3B-201ENST00000416295 STXBP5Q5T5C0 1151 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms