RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 CDK17Q00537 523 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 PPFIA1Q13136 1202 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 PRR31Q5SQ13 230 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 PHF19Q5T6S3 580 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 PPP4R3AQ6IN85 833 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 KANSL1Q7Z3B3 1105 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 RSAD2Q8WXG1 361 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 DACT3Q96B18 629 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-204ENST00000415749 TBC1D20Q96BZ9 403 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF341Q9BYN7 854 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 PRDM12Q9H4Q4 367 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 SPATA6Q9NWH7 488 aaPredicted RBP6.96□□□□□ -1.3
EPHA4-204ENST00000415749 KCMF1Q9P0J7 381 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 FTSJ1Q9UET6 329 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 SYNPO2Q9UMS6 1093 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 PCDHGB2Q9Y5G2 931 aa6.96□□□□□ -1.3
EPHA4-204ENST00000415749 LRRFIP2Q9Y608 721 aaKnown RBP6.96□□□□□ -1.3
EPHA4-204ENST00000415749 ECM29Q5VYK3 1845 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ANKRD18BA2A2Z9 1011 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 PI4KAP2A4QPH2 592 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 J3KRW8 73 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 NUAK1O60285 661 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 CUTAO60888 179 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 KNG1P01042 644 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 PYGLP06737 847 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF28P17035 718 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 TECP42680 631 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 STT3AP46977 705 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 LGALS4P56470 323 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ICA1Q05084 483 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 NEXNQ0ZGT2 675 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 BLMHQ13867 455 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 RTP5Q14D33 572 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 VWA3BQ502W6 1294 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ZBTB41Q5SVQ8 909 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 KANK2Q63ZY3 851 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 GRAMD4Q6IC98 578 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 APOA5Q6Q788 366 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 LMBR1LQ6UX01 489 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 RSRC2Q7L4I2 434 aaKnown RBP6.95□□□□□ -1.3
EPHA4-204ENST00000415749 FASTKD5Q7L8L6 764 aaKnown RBP6.95□□□□□ -1.3
EPHA4-204ENST00000415749 OTOP2Q7RTS6 562 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 UBE3BQ7Z3V4 1068 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 FAM83AQ86UY5 434 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 SUGP1Q8IWZ8 645 aaKnown RBP6.95□□□□□ -1.3
EPHA4-204ENST00000415749 PI4KAP1Q8N8J0 262 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 TDRD7Q8NHU6 1098 aaKnown RBP6.95□□□□□ -1.3
EPHA4-204ENST00000415749 KLHDC4Q8TBB5 520 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ZSCAN18Q8TBC5 510 aaPredicted RBP6.95□□□□□ -1.3
EPHA4-204ENST00000415749 NSUN6Q8TEA1 469 aaKnown RBP6.95□□□□□ -1.3
EPHA4-204ENST00000415749 NRG4Q8WWG1 115 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ARL8AQ96BM9 186 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 CDK5RAP3Q96JB5 506 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 PLA2G12BQ9BX93 195 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 KCTD10Q9H3F6 313 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 STARD7Q9NQZ5 370 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 TMOD2Q9NZR1 351 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 NUMBLQ9Y6R0 609 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 ALPK3Q96L96 1907 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 OTOFQ9HC10 1997 aa6.95□□□□□ -1.3
EPHA4-204ENST00000415749 SNX2O60749 519 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 HIBADHP31937 336 aaKnown RBP6.94□□□□□ -1.3
EPHA4-204ENST00000415749 MLLT6P55198 1093 aaPredicted RBP6.94□□□□□ -1.3
EPHA4-204ENST00000415749 CD83Q01151 205 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 NOLC1Q14978 699 aaKnown RBP eCLIP6.94□□□□□ -1.3
EPHA4-204ENST00000415749 DGKDQ16760 1214 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 C3orf36Q3SXR2 165 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 CCDC157Q569K6 752 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 FKBP1CQ5VVH2 108 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 TCERG1LQ5VWI1 586 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 BMP8AQ7Z5Y6 402 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 NAXEQ8NCW5 288 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 TSPEARQ8WU66 669 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 APIPQ96GX9 242 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 NT5C1BQ96P26 610 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 LBHD1Q9BQE6 289 aaPredicted RBP6.94□□□□□ -1.3
EPHA4-204ENST00000415749 ACE2Q9BYF1 805 aaPredicted RBP6.94□□□□□ -1.3
EPHA4-204ENST00000415749 BTBD1Q9H0C5 482 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 MTG2Q9H4K7 406 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 KMT5AQ9NQR1 393 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF112Q9UJU3 913 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 OGDHLQ9ULD0 1010 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 DENND2AQ9ULE3 1009 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 TPCN1Q9ULQ1 816 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 MAGED2Q9UNF1 606 aaPredicted RBP6.94□□□□□ -1.3
EPHA4-204ENST00000415749 RABGAP1Q9Y3P9 1069 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 DOCK3Q8IZD9 2030 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 ZBED9Q6R2W3 1325 aa6.94□□□□□ -1.3
EPHA4-204ENST00000415749 A0A0G2JNJ9 132 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 hCG_1984214I3L0E3 225 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 DDX3XO00571 662 aaKnown RBP eCLIP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 ADAMTS3O15072 1205 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 HMGCRP04035 888 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 SMARCA1P28370 1054 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 GYG1P46976 350 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 DLX2Q07687 328 aaPredicted RBP6.93□□□□□ -1.3
EPHA4-204ENST00000415749 ZNF543Q08ER8 600 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 TOMM20Q15388 145 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 CCDC30Q5VVM6 783 aa6.93□□□□□ -1.3
EPHA4-204ENST00000415749 ERICH6BQ5W0A0 696 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms