RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 GZF1Q9H116 711 aaPredicted RBP16.62■□□□□ 0.25
ACTB-202ENST00000414620 SNX25Q9H3E2 840 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 KIF9Q9HAQ2 790 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 TDP1Q9NUW8 608 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 C2orf42Q9NWW7 574 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 ZMYM5Q9UJ78 669 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 RCOR1Q9UKL0 485 aa16.62■□□□□ 0.25
ACTB-202ENST00000414620 OTOGLQ3ZCN5 2332 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 TRAV19A0A0A6YYK7 116 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 OTOL1A6NHN0 477 aaPredicted RBP16.61■□□□□ 0.25
ACTB-202ENST00000414620 CKMP06732 381 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 PFKFB1P16118 471 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 GRIK1P39086 918 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 MYL6P60660 151 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 SNRPFP62306 86 aaKnown RBP16.61■□□□□ 0.25
ACTB-202ENST00000414620 TRPC3Q13507 836 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 RUNX3Q13761 415 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 KMT5BQ4FZB7 885 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 DGKKQ5KSL6 1271 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 HEATR6Q6AI08 1181 aaKnown RBP16.61■□□□□ 0.25
ACTB-202ENST00000414620 CC2D1AQ6P1N0 951 aaPredicted RBP16.61■□□□□ 0.25
ACTB-202ENST00000414620 KIAA0895Q8NCT3 520 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 PLEKHO2Q8TD55 490 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 ELMO3Q96BJ8 720 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 PAGE5Q96GU1 130 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 PCED1BQ96HM7 432 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 CYP2S1Q96SQ9 504 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 FAM83CQ9BQN1 747 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 EPC1Q9H2F5 836 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 DPEP3Q9H4B8 488 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 EXOC1Q9NV70 894 aa16.61■□□□□ 0.25
ACTB-202ENST00000414620 NXF1Q9UBU9 619 aaKnown RBP16.61■□□□□ 0.25
ACTB-202ENST00000414620 MYOFQ9NZM1 2061 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 C2orf78A6NCI8 922 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 CHURC1-FNTBB4DL54 471 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 PHACTR2O75167 634 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 ANXA13P27216 316 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 GNL1P36915 607 aaPredicted RBP16.6■□□□□ 0.25
ACTB-202ENST00000414620 MAGEA11P43364 429 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 FNTBP49356 437 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 USP46P62068 366 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 STK4Q13043 487 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 BIRC3Q13489 604 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 CCINQ13939 588 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 MTF1Q14872 753 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 WDR72Q3MJ13 1102 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 PRR23BQ6ZRT6 265 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 C12orf56Q8IXR9 622 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 SPEM1Q8N4L4 309 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 ARL14EPQ8N8R7 260 aaPredicted RBP16.6■□□□□ 0.25
ACTB-202ENST00000414620 RMDN1Q96DB5 314 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 CHFRQ96EP1 664 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 MYRFLQ96LU7 910 aa16.6■□□□□ 0.25
ACTB-202ENST00000414620 FAM126AQ9BYI3 521 aaPredicted RBP16.6■□□□□ 0.25
ACTB-202ENST00000414620 GVINP1Q7Z2Y8 2422 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 USP17L7P0C7H9 530 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 SLFN14P0C7P3 912 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 RAP1GAPP47736 663 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 NRLP54845 237 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 FAM160A1Q05DH4 1040 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 IFRD2Q12894 506 aaPredicted RBP16.59■□□□□ 0.25
ACTB-202ENST00000414620 USP4Q13107 963 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 SRSF5Q13243 272 aaKnown RBP16.59■□□□□ 0.25
ACTB-202ENST00000414620 ZNF268Q14587 947 aaPredicted RBP16.59■□□□□ 0.25
ACTB-202ENST00000414620 MAPRE1Q15691 268 aaKnown RBP16.59■□□□□ 0.25
ACTB-202ENST00000414620 ZNF77Q15935 545 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 NAIF1Q69YI7 327 aaPredicted RBP16.59■□□□□ 0.25
ACTB-202ENST00000414620 FSTL4Q6MZW2 842 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 PKN3Q6P5Z2 889 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 SCARA5Q6ZMJ2 495 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 DENND5BQ6ZUT9 1274 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 FSIP1Q8NA03 581 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 MYCBPAPQ8TBZ2 947 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 WNT6Q9Y6F9 365 aa16.59■□□□□ 0.25
ACTB-202ENST00000414620 EP300Q09472 2414 aaPredicted RBP16.59■□□□□ 0.25
ACTB-202ENST00000414620 LRRIQ3A6PVS8 624 aaPredicted RBP16.58■□□□□ 0.24
ACTB-202ENST00000414620 A8MXQ7 604 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 F8VP50 259 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 K7ESF4 209 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 CLDN5O00501 218 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 TRIM66O15016 1216 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 TACC1O75410 805 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 PRR29P0C7W0 189 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 IFNAR2P48551 515 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 CACNA2D1P54289 1103 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 KCNB1Q14721 858 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 TDRD10Q5VZ19 366 aaKnown RBP16.58■□□□□ 0.24
ACTB-202ENST00000414620 VSTM1Q6UX27 236 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 MAMSTRQ6ZN01 415 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 SECISBP2LQ93073 1101 aaKnown RBP16.58■□□□□ 0.24
ACTB-202ENST00000414620 SYAP1Q96A49 352 aaPredicted RBP16.58■□□□□ 0.24
ACTB-202ENST00000414620 SPATA17Q96L03 361 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 ZNF518BQ9C0D4 1074 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 SMYD3Q9H7B4 428 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 DUS2Q9NX74 493 aaKnown RBP16.58■□□□□ 0.24
ACTB-202ENST00000414620 GCNT4Q9P109 453 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 CGNQ9P2M7 1197 aaKnown RBP16.58■□□□□ 0.24
ACTB-202ENST00000414620 GMEB2Q9UKD1 530 aa16.58■□□□□ 0.24
ACTB-202ENST00000414620 ZDHHC9Q9Y397 364 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms