RNA–Protein interactions for RNA: ENST00000414411.3

DDB1-202, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,904 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-202ENST00000414411 NME7Q9Y5B8 376 aa10.56□□□□□ -0.72
DDB1-202ENST00000414411 F8VZ95 297 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 SYN3O14994 580 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 FGF18O76093 207 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 OAZ2O95190 189 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 RB1P06400 928 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 TYMPP19971 482 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 WARSP23381 471 aaKnown RBP10.55□□□□□ -0.72
DDB1-202ENST00000414411 STAT1P42224 750 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 SMAD3P84022 425 aaKnown RBP10.55□□□□□ -0.72
DDB1-202ENST00000414411 DRAP1Q14919 205 aaPredicted RBP10.55□□□□□ -0.72
DDB1-202ENST00000414411 LRIT3Q3SXY7 679 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 HSP90B2PQ58FF3 399 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 FAM71AQ8IYT1 594 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 TMEM86AQ8N2M4 240 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 SPATA18Q8TC71 538 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 WHAMMQ8TF30 809 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 EXOC4Q96A65 974 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 TMEM169Q96HH4 297 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 MS4A14Q96JA4 679 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 TGS1Q96RS0 853 aaKnown RBP10.55□□□□□ -0.72
DDB1-202ENST00000414411 STIM2Q9P246 746 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 ADAM21Q9UKJ8 722 aa10.55□□□□□ -0.72
DDB1-202ENST00000414411 TIMM13Q9Y5L4 95 aaPredicted RBP10.55□□□□□ -0.72
DDB1-202ENST00000414411 DDX3XO00571 662 aaKnown RBP eCLIP10.54□□□□□ -0.72
DDB1-202ENST00000414411 CILPO75339 1184 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 GFPT2O94808 682 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 SOD2P04179 222 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 ODC1P11926 461 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TNFRSF8P28908 595 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TKTP29401 623 aaKnown RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 SOX5P35711 763 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 RAP1GAPP47736 663 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 GYS2P54840 703 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 IFI16Q16666 785 aaKnown RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 ARHGAP44Q17R89 818 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 GLE1Q53GS7 698 aaKnown RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 C8orf74Q6P047 294 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 SCARA5Q6ZMJ2 495 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 OSTM1Q86WC4 334 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TTC39CQ8N584 583 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 LRRC57Q8N9N7 239 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 OLIG1Q8TAK6 271 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 SAMD11Q96NU1 681 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 RTP3Q9BQQ7 232 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 PSD3Q9NYI0 1048 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 VPS18Q9P253 973 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 MSRAQ9UJ68 235 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 DSEQ9UL01 958 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 INTUQ9ULD6 942 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 BARX2Q9UMQ3 279 aaPredicted RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 PACSIN2Q9UNF0 486 aaPredicted RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 STXBP5LQ9Y2K9 1186 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TSC2P49815 1807 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 SZT2Q5T011 3432 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 A0A0A6YYK5 440 aaPredicted RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 ARHGEF37A1IGU5 675 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 CES2O00748 559 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TBC1D4O60343 1298 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 CD58P19256 250 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 DNAJB2P25686 324 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 LMO2P25791 158 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 CTNNB1P35222 781 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 GNL1P36915 607 aaPredicted RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 LHX1P48742 406 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 DNA2P51530 1060 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 ZNF132P52740 706 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 KRT17Q04695 432 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 RTP2Q5QGT7 225 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 KIAA0319Q5VV43 1072 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 UNC93AQ86WB7 457 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 ADGRF2Q8IZF7 708 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 SPPL3Q8TCT6 385 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 B3GALT6Q96L58 329 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TWNKQ96RR1 684 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 TTPALQ9BTX7 342 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 NKX2-4Q9H2Z4 354 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 STK39Q9UEW8 545 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
DDB1-202ENST00000414411 ARIH1Q9Y4X5 557 aaPredicted RBP10.54□□□□□ -0.72
DDB1-202ENST00000414411 LILRB3O75022 631 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 H2AFZP0C0S5 128 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 NDST1P52848 882 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 YWHAEP62258 255 aaKnown RBP10.53□□□□□ -0.72
DDB1-202ENST00000414411 SLC7A5Q01650 507 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 DSG1Q02413 1049 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 CAMK1Q14012 370 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 VARS2Q5ST30 1063 aaKnown RBP10.53□□□□□ -0.72
DDB1-202ENST00000414411 OVOS1Q6IE37 1185 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 TMEM270Q6UE05 265 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 H2AFVQ71UI9 128 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 DNAAF5Q86Y56 855 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 FMNL3Q8IVF7 1028 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 GPR65Q8IYL9 337 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 CRYBG2Q8N1P7 616 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 OR6B3Q8NGW1 331 aa10.53□□□□□ -0.72
DDB1-202ENST00000414411 SLC30A5Q8TAD4 765 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms