RNA–Protein interactions for RNA: ENST00000413971.5

TOP2B-202, Transcript of DNA topoisomerase II beta, humanhuman

TSL 5

Gene TOP2B, Length 2,049 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-202ENST00000413971 VPS28Q9UK41 221 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 NAP1L2Q9ULW6 460 aaPredicted RBP4.7□□□□□ -1.66
TOP2B-202ENST00000413971 A0A1W2PPL8 197 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 MYO1FO00160 1098 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 MAN2B1O00754 1011 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 NKRFO15226 690 aaKnown RBP eCLIP4.7□□□□□ -1.66
TOP2B-202ENST00000413971 DAPK3O43293 454 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 GDF9O60383 454 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 RNGTTO60942 597 aaKnown RBP4.7□□□□□ -1.66
TOP2B-202ENST00000413971 HOXC6P09630 235 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 PSMA3P25788 255 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 AOAHP28039 575 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 CYP2C18P33260 490 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 CCR5P51681 352 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 ZNF131P52739 623 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 SEC24CP53992 1094 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 FOXO4P98177 505 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 CDC16Q13042 620 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 TRIM28Q13263 835 aaKnown RBP4.7□□□□□ -1.66
TOP2B-202ENST00000413971 C3orf38Q5JPI3 329 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 MFSD14BQ5SR56 506 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 CWF19L1Q69YN2 538 aaKnown RBP4.7□□□□□ -1.66
TOP2B-202ENST00000413971 CHD1LQ86WJ1 897 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 SIAH1Q8IUQ4 282 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 ZZZ3Q8IYH5 903 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 CARNMT1Q8N4J0 409 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 SH3RF2Q8TEC5 729 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 FAM151AQ8WW52 585 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 C16orf92Q96LL3 132 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 ANKRD2Q9GZV1 360 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 SIL1Q9H173 461 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 SSU72Q9NP77 194 aaKnown RBP4.7□□□□□ -1.66
TOP2B-202ENST00000413971 IGSF9Q9P2J2 1179 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 DENND2AQ9ULE3 1009 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 MAN2B2Q9Y2E5 1009 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 PCDHB1Q9Y5F3 818 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 B3GALT1Q9Y5Z6 326 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 PTPRFP10586 1907 aa4.7□□□□□ -1.66
TOP2B-202ENST00000413971 HELZ2Q9BYK8 2649 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PI4KAP2A4QPH2 592 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 TTC36A6NLP5 189 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 F5H0A9 414 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 LCE2BO14633 110 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 RGS9O75916 674 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 LRIG2O94898 1065 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PDGFBP01127 241 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 GNAT1P11488 350 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 IDEP14735 1019 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 HOXD13P35453 343 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 KCNJ4P48050 445 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 SUMO3P55854 103 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 HTRA4P83105 476 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR20EP86478 221 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR20CP86479 221 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR20DP86480 221 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR20BP86481 221 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR20AP86496 221 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PTK2BQ14289 1009 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 BECN1Q14457 450 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 GPR19Q15760 415 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ANKRD45Q5TZF3 282 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR23BQ6ZRT6 265 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 C15orf52Q6ZUT6 534 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 B4GALNT4Q76KP1 1039 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 IQCA1Q86XH1 822 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 CPNE8Q86YQ8 564 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 KSR1Q8IVT5 923 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 HERC6Q8IVU3 1022 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ADGRG2Q8IZP9 1017 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 SH2D3CQ8N5H7 860 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 MFSD2AQ8NA29 543 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ATP11CQ8NB49 1132 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ZMIZ2Q8NF64 920 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 RAB24Q969Q5 203 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PABPC5Q96DU9 382 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ZNF837Q96EG3 531 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ZC3H10Q96K80 434 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 JAKMIP1Q96N16 626 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 HNRNPABQ99729 332 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 MRPL9Q9BYD2 267 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ACE2Q9BYF1 805 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 TXLNGYQ9BZA5 131 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PAIP1Q9H074 479 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 SUGCTQ9HAC7 445 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ACSS2Q9NR19 701 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 KCND1Q9NSA2 647 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PRR13Q9NZ81 148 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 USP36Q9P275 1121 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 MYO1AQ9UBC5 1043 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 RBPJLQ9UBG7 517 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 ADD3Q9UEY8 706 aaKnown RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 PCDHA13Q9Y5I0 950 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 MROH7Q68CQ1 1323 aa4.69□□□□□ -1.66
TOP2B-202ENST00000413971 COL4A4P53420 1690 aaPredicted RBP4.69□□□□□ -1.66
TOP2B-202ENST00000413971 A0A1B0GUL7 405 aa4.68□□□□□ -1.66
TOP2B-202ENST00000413971 SHISA3A0PJX4 238 aa4.68□□□□□ -1.66
TOP2B-202ENST00000413971 H3BUI4 141 aa4.68□□□□□ -1.66
TOP2B-202ENST00000413971 H7C1W4 665 aa4.68□□□□□ -1.66
TOP2B-202ENST00000413971 PODXLO00592 558 aa4.68□□□□□ -1.66
TOP2B-202ENST00000413971 HTATSF1O43719 755 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms