RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 INTS8Q75QN2 995 aaKnown RBP28.06■■■□□ 2.08
VEGFA-207ENST00000413642 CMTM8Q8IZV2 173 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 TTC8Q8TAM2 541 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 CCL26Q9Y258 94 aa28.06■■■□□ 2.08
VEGFA-207ENST00000413642 KRT13P13646 458 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 PIK3CAP42336 1068 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 MRE11P49959 708 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 ORC1Q13415 861 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 VSTM1Q6UX27 236 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 B3GALNT2Q8NCR0 500 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 TAS1R2Q8TE23 839 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 MRPS31Q92665 395 aaKnown RBP28.05■■■□□ 2.08
VEGFA-207ENST00000413642 TRMT2BQ96GJ1 504 aaKnown RBP28.05■■■□□ 2.08
VEGFA-207ENST00000413642 CIZ1Q9ULV3 898 aaPredicted RBP28.05■■■□□ 2.08
VEGFA-207ENST00000413642 WDFY4Q6ZS81 3184 aa28.05■■■□□ 2.08
VEGFA-207ENST00000413642 F8VP50 259 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 CHADO15335 359 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 ASS1P00966 412 aaKnown RBP28.04■■■□□ 2.08
VEGFA-207ENST00000413642 WEE1P30291 646 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 ANKRD40Q6AI12 368 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 MON1AQ86VX9 555 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 USP13Q92995 863 aaPredicted RBP28.04■■■□□ 2.08
VEGFA-207ENST00000413642 APOBEC3GQ9HC16 384 aaKnown RBP28.04■■■□□ 2.08
VEGFA-207ENST00000413642 TRPV5Q9NQA5 729 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 HMGXB4Q9UGU5 601 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 PIAS3Q9Y6X2 628 aa28.04■■■□□ 2.08
VEGFA-207ENST00000413642 TRIM49BA6NDI0 452 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 ASPAP45381 313 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 SOX9P48436 509 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 ZNF852Q6ZMS4 543 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 RIN3Q8TB24 985 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 BPIFB1Q8TDL5 484 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 SPATA17Q96L03 361 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 SLC22A12Q96S37 553 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 CYP2S1Q96SQ9 504 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 TRPC7Q9HCX4 862 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 OBP2AQ9NY56 170 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 UXTQ9UBK9 157 aaPredicted RBP28.03■■■□□ 2.08
VEGFA-207ENST00000413642 MAN1B1Q9UKM7 699 aa28.03■■■□□ 2.08
VEGFA-207ENST00000413642 NDRG2Q9UN36 371 aaKnown RBP28.03■■■□□ 2.08
VEGFA-207ENST00000413642 ANXA13P27216 316 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 AVPR1AP37288 418 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 FZD5Q13467 585 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 COBLL1Q53SF7 1204 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 PAQR9Q6ZVX9 377 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 ACOT1Q86TX2 421 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 ADSSL1Q8N142 457 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 CELF5Q8N6W0 485 aaKnown RBP28.02■■■□□ 2.08
VEGFA-207ENST00000413642 TAF4BQ92750 862 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 C8orf48Q96LL4 319 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 IRF2BPLQ9H1B7 796 aa28.02■■■□□ 2.08
VEGFA-207ENST00000413642 C2orf78A6NCI8 922 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 CETN3O15182 167 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 KINO60870 393 aaKnown RBP28.01■■■□□ 2.07
VEGFA-207ENST00000413642 CD44P16070 742 aaKnown RBP28.01■■■□□ 2.07
VEGFA-207ENST00000413642 DDX6P26196 483 aaKnown RBP eCLIP28.01■■■□□ 2.075e-8■□□□□ 10.5
VEGFA-207ENST00000413642 NDST1P52848 882 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 TNK2Q07912 1038 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 DENND5BQ6ZUT9 1274 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 CSGALNACT1Q8TDX6 532 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 OSBPL6Q9BZF3 934 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 GTSE1Q9NYZ3 720 aa28.01■■■□□ 2.07
VEGFA-207ENST00000413642 HOOK1Q9UJC3 728 aaKnown RBP28.01■■■□□ 2.07
VEGFA-207ENST00000413642 TRIM66O15016 1216 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 CCNE1P24864 410 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 MCCD1P59942 119 aaPredicted RBP28■■■□□ 2.07
VEGFA-207ENST00000413642 ARHGAP29Q52LW3 1261 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 ZNF687Q8N1G0 1237 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 FAM3CQ92520 227 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 SEMA4DQ92854 862 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 KCNK16Q96T55 309 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 ELOVL4Q9GZR5 314 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 TMEM8AQ9HCN3 771 aa28■■■□□ 2.07
VEGFA-207ENST00000413642 EPB41P11171 864 aaKnown RBP27.99■■■□□ 2.07
VEGFA-207ENST00000413642 P4HA1P13674 534 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 FAM35AQ86V20 835 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 C1orf210Q8IVY1 113 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 ELOA2Q8IYF1 753 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-207ENST00000413642 ARL14EPQ8N8R7 260 aaPredicted RBP27.99■■■□□ 2.07
VEGFA-207ENST00000413642 TWNKQ96RR1 684 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 NELL2Q99435 816 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 TSG101Q99816 390 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 MED10Q9BTT4 135 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 BCO2Q9BYV7 579 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 GKN1Q9NS71 199 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 TDP1Q9NUW8 608 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 ZMYM5Q9UJ78 669 aa27.99■■■□□ 2.07
VEGFA-207ENST00000413642 COL4A2P08572 1712 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 MAN2B1O00754 1011 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 CCDC130P13994 396 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 BMP6P22004 513 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 KPNA1P52294 538 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-207ENST00000413642 NOP14P78316 857 aaKnown RBP27.98■■■□□ 2.07
VEGFA-207ENST00000413642 ENPEPQ07075 957 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 IFRD2Q12894 506 aaPredicted RBP27.98■■■□□ 2.07
VEGFA-207ENST00000413642 FRMD5Q7Z6J6 570 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 ZC3H3Q8IXZ2 948 aaKnown RBP27.98■■■□□ 2.07
VEGFA-207ENST00000413642 TTC16Q8NEE8 873 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 CLDN23Q96B33 292 aa27.98■■■□□ 2.07
VEGFA-207ENST00000413642 TNIP3Q96KP6 325 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms