RNA–Protein interactions for RNA: ENST00000412141.1

LINC00963-201, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 739 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-201ENST00000412141 ORC1Q13415 861 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 NCOA4Q13772 614 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 CFAP221Q4G0U5 840 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 ZC3H14Q6PJT7 736 aaKnown RBP12.38□□□□□ -0.43
LINC00963-201ENST00000412141 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 ZNF687Q8N1G0 1237 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 ARL14EPQ8N8R7 260 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-201ENST00000412141 RIN3Q8TB24 985 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 MYCBPAPQ8TBZ2 947 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 SPATA18Q8TC71 538 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 PARD3BQ8TEW8 1205 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 ATRIPQ8WXE1 791 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 CCDC47Q96A33 483 aaKnown RBP12.38□□□□□ -0.43
LINC00963-201ENST00000412141 PCED1BQ96HM7 432 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
LINC00963-201ENST00000412141 XYLT2Q9H1B5 865 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 EBF3Q9H4W6 596 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 C8orf33Q9H7E9 229 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-201ENST00000412141 MMRN2Q9H8L6 949 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 TDP1Q9NUW8 608 aa12.38□□□□□ -0.43
LINC00963-201ENST00000412141 UXTQ9UBK9 157 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-201ENST00000412141 OTOGLQ3ZCN5 2332 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 C2orf78A6NCI8 922 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 F8VP50 259 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 PDXKO00764 312 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 KINO60870 393 aaKnown RBP12.37□□□□□ -0.43
LINC00963-201ENST00000412141 TACC1O75410 805 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 VNN1O95497 513 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 CHRNB1P11230 501 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 CTHP32929 405 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 MAGEA9P43362 315 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 MAGEA11P43364 429 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 RPS9P46781 194 aaKnown RBP12.37□□□□□ -0.43
LINC00963-201ENST00000412141 CACNA2D1P54289 1103 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 DPYDQ12882 1025 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 BECN1Q14457 450 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 MAPRE1Q15691 268 aaKnown RBP12.37□□□□□ -0.43
LINC00963-201ENST00000412141 ITPRIPL2Q3MIP1 535 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 ZNF667Q5HYK9 610 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 CC2D1AQ6P1N0 951 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-201ENST00000412141 Q6ZS52 159 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 SMYD4Q8IYR2 804 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-201ENST00000412141 DCLK2Q8N568 766 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-201ENST00000412141 EEF2KMTQ96G04 330 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 MED10Q9BTT4 135 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 ZNF518BQ9C0D4 1074 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 CHRDQ9H2X0 955 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 DMAC2Q9NW81 257 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 OBP2AQ9NY56 170 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 FBXO4Q9UKT5 387 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 FRMD4BQ9Y2L6 1034 aa12.37□□□□□ -0.43
LINC00963-201ENST00000412141 TRAV19A0A0A6YYK7 116 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 A0A1W2PQ27 194 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 A0A1W2PQ64 194 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 A0A1W2PQD8 194 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 GOLGA6L4A6NEF3 574 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 OTOL1A6NHN0 477 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 SCAMP3O14828 347 aaKnown RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 CALUO43852 315 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 C4BPAP04003 597 aaKnown RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 USP17L7P0C7H9 530 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 TRIM49P0CI25 452 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 TRIM49CP0CI26 452 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 HDCP19113 662 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 DDX6P26196 483 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 WEE1P30291 646 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 HOXC13P31276 330 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 ATICP31939 592 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 SATB1Q01826 763 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 GAS6Q14393 721 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 KCNB1Q14721 858 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 WDR44Q5JSH3 913 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 HEATR6Q6AI08 1181 aaKnown RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 SPOPLQ6IQ16 392 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 VSTM1Q6UX27 236 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 RALGPS2Q86X27 583 aaPredicted RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 B3GALNT2Q8NCR0 500 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 TRMT2BQ96GJ1 504 aaKnown RBP12.36□□□□□ -0.43
LINC00963-201ENST00000412141 B3GNT5Q9BYG0 378 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 SDCBP2Q9H190 292 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 HPS4Q9NQG7 708 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 TMEM30AQ9NV96 361 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 WNT6Q9Y6F9 365 aa12.36□□□□□ -0.43
LINC00963-201ENST00000412141 CEP250Q9BV73 2442 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 FAM237AA0A1B0GTK4 181 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 RHOBTB3O94955 611 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 MYL1P05976 194 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 NR2F2P24468 414 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 PIK3CAP42336 1068 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 CXCL12P48061 93 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 GCLMP48507 274 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 VAMP7P51809 220 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 PNOCQ13519 176 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 RUNX3Q13761 415 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 LRRC32Q14392 662 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 LPAL2Q16609 132 aa12.35□□□□□ -0.43
LINC00963-201ENST00000412141 NAIF1Q69YI7 327 aaPredicted RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms