RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 TTC39BQ5VTQ0 682 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 HIBCHQ6NVY1 386 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 LARP4BQ92615 738 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 IFT80Q9P2H3 777 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF222Q9UK12 451 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SLC12A4Q9UP95 1085 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 LOC100653049A0A140TA62 436 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 UBA6A0AVT1 1052 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 POLR1CO15160 346 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZBTB43O43298 467 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ATP9BO43861 1147 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 VPS4BO75351 444 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KRT34O76011 436 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RLN2P04090 185 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NTRK1P04629 796 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 AKT1P31749 480 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RORAP35398 523 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ACTR3P61158 418 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ACSM2AQ08AH3 577 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 UBE3CQ15386 1083 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CCDC58Q4VC31 144 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FNBP1LQ5T0N5 605 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GPR158Q5T848 1215 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MIS18BP1Q6P0N0 1132 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 MON1BQ7L1V2 547 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ARMCX2Q7L311 632 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 REC114Q7Z4M0 266 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF808Q8N4W9 903 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PIH1D2Q8WWB5 315 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CNOT9Q92600 299 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KAT2AQ92830 837 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TSPAN17Q96FV3 270 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PAGR1Q9BTK6 254 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KCNN2Q9H2S1 579 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 LNPEPQ9UIQ6 1025 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GTF3C4Q9UKN8 822 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 OGDHLQ9ULD0 1010 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PALD1Q9ULE6 856 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 DAGLAQ9Y4D2 1042 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF451Q9Y4E5 1061 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 YTHDF2Q9Y5A9 579 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TRPV2Q9Y5S1 764 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CTIFO43310 598 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF208O43345 1280 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FCGR1AP12314 374 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ALOX15P16050 662 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PRIM1P49642 420 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TRIP13Q15645 432 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CHRNA6Q15825 494 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PFKFB3Q16875 520 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 BMT2Q1RMZ1 405 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 FAM98BQ52LJ0 330 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TCHHL1Q5QJ38 904 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 BNIPLQ7Z465 357 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 YAF2Q8IY57 180 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SPATA6LQ8N4H0 392 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 OR14K1Q8NGZ2 314 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SMPDL3BQ92485 455 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ASIC4Q96FT7 647 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 C17orf80Q9BSJ5 609 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ACE2Q9BYF1 805 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PABPC3Q9H361 631 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GABBR1Q9UBS5 961 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZBTB21Q9ULJ3 1066 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PCDHGB5Q9Y5G0 923 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SYNRGQ9UMZ2 1314 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 TRDMT1O14717 391 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PENKP01210 267 aaPredicted RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CTNNB1P35222 781 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 NAMPTP43490 491 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 UQCRFS1P47985 274 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 USP11P51784 963 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CACNB3P54284 484 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF844Q08AG5 666 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 KLHL40Q2TBA0 621 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZNF792Q3KQV3 632 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 OR5T3Q8NGG3 340 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 DEPTORQ8TB45 409 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 SPIRE2Q8WWL2 714 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 EXT2Q93063 718 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 GTPBP3Q969Y2 492 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PPP1R16AQ96I34 528 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 RBM41Q96IZ5 413 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 C1orf50Q9BV19 199 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CXorf56Q9H5V9 222 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ARHGEF10LQ9HCE6 1279 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 CROTQ9UKG9 612 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 C14orf166Q9Y224 244 aaKnown RBP4.75□□□□□ -1.65
PTPN13-202ENST00000411767 PTPN22Q9Y2R2 807 aa4.75□□□□□ -1.65
PTPN13-202ENST00000411767 ZBTB5O15062 677 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 FLRT2O43155 660 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 FAM228BP0C875 321 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 LBPP18428 481 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 MDH1P40925 334 aaKnown RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 RAP1GAPP47736 663 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 TBX2Q13207 712 aaPredicted RBP4.74□□□□□ -1.65
PTPN13-202ENST00000411767 TPRG1LQ5T0D9 272 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 BROXQ5VW32 411 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 CARD17Q5XLA6 110 aa4.74□□□□□ -1.65
PTPN13-202ENST00000411767 DARS2Q6PI48 645 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms