RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 SLC35F5Q8WV83 523 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SSB-202ENST00000409333 HERC2P3Q9BVR0 1158 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 TMEM30AQ9NV96 361 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 CHD7Q9P2D1 2997 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 MYO1AQ9UBC5 1043 aa17.8■□□□□ 0.44
SSB-202ENST00000409333 CNOT8Q9UFF9 292 aaKnown RBP17.8■□□□□ 0.44
SSB-202ENST00000409333 C2CD2LO14523 706 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 BUB1O43683 1085 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 TBC1D4O60343 1298 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 RRM1P23921 792 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 RGS7P49802 495 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
SSB-202ENST00000409333 CYP4A22Q5TCH4 519 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 PPP1R2P3Q6NXS1 205 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 PMF1Q6P1K2 205 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 DUSP16Q9BY84 665 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 ST7Q9NRC1 585 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 CHD9Q3L8U1 2897 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 OR6C75A6NL08 312 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 BTNL10A8MVZ5 291 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 H7C4K7 107 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 PIK3R2O00459 728 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 FAM200BP0CF97 657 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 NPR3P17342 541 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 RPL17P18621 184 aaKnown RBP17.79■□□□□ 0.44
SSB-202ENST00000409333 CTNNB1P35222 781 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 GLUD2P49448 558 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 MAPRE1Q15691 268 aaKnown RBP17.79■□□□□ 0.44
SSB-202ENST00000409333 PSMD5Q16401 504 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 KIAA1841Q6NSI8 718 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 VPS52Q8N1B4 723 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 PIK3R5Q8WYR1 880 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 RFFLQ8WZ73 363 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 SMARCD1Q96GM5 515 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 NOX5Q96PH1 765 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 OSGEPQ9NPF4 335 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 MTRRQ9UBK8 725 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 CDY1Q9Y6F8 540 aa17.79■□□□□ 0.44
SSB-202ENST00000409333 ADAM12O43184 909 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 AP1G2O75843 785 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 MOCS3O95396 460 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 ERBB2P04626 1255 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 CYP1A2P05177 515 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 SETSIPP0DME0 302 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 MYBL1P10243 752 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 CPB1P15086 417 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 BDNFP23560 247 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 ARPP19P56211 112 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 MAP3K7CLP57077 242 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 DSG1Q02413 1049 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 SPATA2LQ8IUW3 424 aaPredicted RBP17.78■□□□□ 0.44
SSB-202ENST00000409333 DCP1BQ8IZD4 617 aaKnown RBP17.78■□□□□ 0.44
SSB-202ENST00000409333 SLC35G2Q8TBE7 412 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 AUTS2Q8WXX7 1259 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 TRIM11Q96F44 468 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 VCPIP1Q96JH7 1222 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 PGLYRP2Q96PD5 576 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 KCNK16Q96T55 309 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 SMOQ99835 787 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 C17orf80Q9BSJ5 609 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 COG5Q9UP83 839 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 CAPN6Q9Y6Q1 641 aa17.78■□□□□ 0.44
SSB-202ENST00000409333 A0A0A6YYK5 440 aaPredicted RBP17.77■□□□□ 0.44
SSB-202ENST00000409333 E5RJQ4 531 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 GABBR2O75899 941 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 CALB1P05937 261 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 CA3P07451 260 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 DNAJB2P25686 324 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 BMPR1AP36894 532 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 PLA2G4AP47712 749 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 KRT17Q04695 432 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 PTPN14Q15678 1187 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 C4orf50Q6ZRC1 276 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 PIGZQ86VD9 579 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 FBXO22Q8NEZ5 403 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 ZMIZ2Q8NF64 920 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 SLC4A5Q9BY07 1137 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 SYNCQ9H7C4 482 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 ABI2Q9NYB9 513 aaPredicted RBP17.77■□□□□ 0.44
SSB-202ENST00000409333 MTUS1Q9ULD2 1270 aa17.77■□□□□ 0.44
SSB-202ENST00000409333 MTCL1Q9Y4B5 1905 aaKnown RBP17.77■□□□□ 0.44
SSB-202ENST00000409333 XPO1O14980 1071 aaKnown RBP17.76■□□□□ 0.43
SSB-202ENST00000409333 URODP06132 367 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 GABRB2P47870 512 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 NAP1L1P55209 391 aaKnown RBP17.76■□□□□ 0.43
SSB-202ENST00000409333 XYLT1Q86Y38 959 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 IPO4Q8TEX9 1081 aaKnown RBP17.76■□□□□ 0.43
SSB-202ENST00000409333 C18orf8Q96DM3 657 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 NUP85Q9BW27 656 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 ZBP1Q9H171 429 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 AVENQ9NQS1 362 aaPredicted RBP17.76■□□□□ 0.43
SSB-202ENST00000409333 CTTNBP2NLQ9P2B4 639 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 YBX2Q9Y2T7 364 aaKnown RBP17.76■□□□□ 0.43
SSB-202ENST00000409333 BACE2Q9Y5Z0 518 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 WDR27A2RRH5 827 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 KIF5CO60282 957 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 GJB6O95452 261 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 VNN2O95498 520 aa17.76■□□□□ 0.43
SSB-202ENST00000409333 CYP2F1P24903 491 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms