RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 ACBD6Q9BR61 282 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 PI4K2AQ9BTU6 479 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 LSM14BQ9BX40 385 aaKnown RBP9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 TDP1Q9NUW8 608 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 TBC1D7Q9P0N9 293 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 AGAP1Q9UPQ3 857 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 CCL26Q9Y258 94 aa9.86□□□□□ -0.83
NIF3L1-203ENST00000409129 SCN1AP35498 2009 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 NUP210Q8TEM1 1887 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 PI4KAP42356 2102 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TSC2P49815 1807 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TRDMT1O14717 391 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GPR37O15354 613 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 HUS1O60921 280 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GCNT3O95395 438 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 ITGB3P05106 788 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 PDCP20941 246 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GARTP22102 1010 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 POLR2BP30876 1174 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TXLNAP40222 546 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GPR15P49685 360 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 NOVA1P51513 510 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 RPL10AP62906 217 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GRSF1Q12849 480 aaKnown RBP eCLIP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 BFSP1Q12934 665 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 CUL4AQ13619 759 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TMEM196Q5HYL7 178 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TXNDC8Q6A555 127 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TRIM68Q6AZZ1 485 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 KIAA1211LQ6NV74 962 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 CEP68Q76N32 757 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 MON1AQ86VX9 555 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 BRSK2Q8IWQ3 736 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 SYCP3Q8IZU3 236 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 TMEM86AQ8N2M4 240 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 CSGALNACT2Q8N6G5 542 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 C1orf127Q8N9H9 656 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 LEO1Q8WVC0 666 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 MRPS31Q92665 395 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 SAAL1Q96ER3 474 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 SCNM1Q9BWG6 230 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 EBF3Q9H4W6 596 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 KIF9Q9HAQ2 790 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 ABCB6Q9NP58 842 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 HPS4Q9NQG7 708 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 OLFML3Q9NRN5 406 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GDAP2Q9NXN4 497 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 DDX43Q9NXZ2 648 aaKnown RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 RBAKQ9NYW8 714 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 L1RE1Q9UN81 338 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 MAGED2Q9UNF1 606 aaPredicted RBP9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 ANK1P16157 1881 aa9.85□□□□□ -0.83
NIF3L1-203ENST00000409129 GOLGA8IPA6NC78 632 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 OTOL1A6NHN0 477 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 GOLGA8JA6NMD2 632 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 EXTL3O43909 919 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 FOXD2O60548 495 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 ATG13O75143 517 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 NUDT7P0C024 238 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 IDEP14735 1019 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CYP2F1P24903 491 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CASP5P51878 434 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 RBP5P82980 135 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 AMPD2Q01433 879 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 MYL7Q01449 175 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CEBPZQ03701 1054 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 ALCAMQ13740 583 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 ZNF268Q14587 947 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 DDR2Q16832 855 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 INTS6LQ5JSJ4 861 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 SDHAF4Q5VUM1 108 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 SCARA3Q6AZY7 606 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 FSTL4Q6MZW2 842 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CC2D1AQ6P1N0 951 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 PKN3Q6P5Z2 889 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 C19orf48Q6RUI8 117 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CCDC73Q6ZRK6 1079 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 LRRC52Q8N7C0 313 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 STKLD1Q8NE28 680 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CXorf38Q8TB03 319 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 SPATA18Q8TC71 538 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 TRMT2BQ96GJ1 504 aaKnown RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 MYRFLQ96LU7 910 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 PKMYT1Q99640 499 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 PANK2Q9BZ23 570 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 PCIF1Q9H4Z3 704 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 PANK4Q9NVE7 773 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 UXTQ9UBK9 157 aaPredicted RBP9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 GTF3C4Q9UKN8 822 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 ITGA11Q9UKX5 1188 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 SNX9Q9Y5X1 595 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 KIAA1549LQ6ZVL6 1849 aa9.84□□□□□ -0.83
NIF3L1-203ENST00000409129 CCDC163A0A0D9SF12 145 aa9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 FRMD3A2A2Y4 597 aa9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 GABRDO14764 452 aa9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 NOL4O94818 638 aa9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 PRPF6O94906 941 aaKnown RBP9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 KRT19P08727 400 aa9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 ZNF806P0C7X5 589 aa9.83□□□□□ -0.84
NIF3L1-203ENST00000409129 ARSAP15289 507 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms